Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.95□□□□□ -0.02
ALFQ53S48 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.95□□□□□ -0.02
ALFQ53S48 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ALFQ53S48 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 AC138028.6-201ENST00000616106 1482 ntBASIC14.95□□□□□ -0.02
ALFQ53S48 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ALFQ53S48 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.95□□□□□ -0.02
ALFQ53S48 AC018629.1-201ENST00000623381 1736 ntBASIC14.95□□□□□ -0.02
ALFQ53S48 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.94□□□□□ -0.02
ALFQ53S48 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ALFQ53S48 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
ALFQ53S48 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ALFQ53S48 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
ALFQ53S48 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ALFQ53S48 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ALFQ53S48 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ALFQ53S48 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
ALFQ53S48 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ALFQ53S48 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
ALFQ53S48 AC078875.1-201ENST00000431907 724 ntBASIC14.94□□□□□ -0.02
ALFQ53S48 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.94□□□□□ -0.02
ALFQ53S48 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.94□□□□□ -0.02
ALFQ53S48 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.94□□□□□ -0.02
ALFQ53S48 SCARNA20.5-201ENST00000516991 142 ntBASIC14.94□□□□□ -0.02
ALFQ53S48 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.94□□□□□ -0.02
ALFQ53S48 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.94□□□□□ -0.02
ALFQ53S48 AC005586.2-201ENST00000563946 837 ntBASIC14.94□□□□□ -0.02
ALFQ53S48 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ALFQ53S48 AC026740.1-201ENST00000607068 791 ntBASIC14.94□□□□□ -0.02
ALFQ53S48 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.94□□□□□ -0.02
ALFQ53S48 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
ALFQ53S48 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.94□□□□□ -0.02
ALFQ53S48 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ALFQ53S48 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ALFQ53S48 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.94□□□□□ -0.02
ALFQ53S48 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ALFQ53S48 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ALFQ53S48 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ALFQ53S48 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ALFQ53S48 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ALFQ53S48 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ALFQ53S48 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.94□□□□□ -0.02
ALFQ53S48 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.93□□□□□ -0.02
ALFQ53S48 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
ALFQ53S48 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ALFQ53S48 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.93□□□□□ -0.02
ALFQ53S48 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.93□□□□□ -0.02
ALFQ53S48 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ALFQ53S48 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ALFQ53S48 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ALFQ53S48 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.93□□□□□ -0.02
ALFQ53S48 XBP1P1-201ENST00000436573 652 ntBASIC14.93□□□□□ -0.02
ALFQ53S48 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.93□□□□□ -0.02
ALFQ53S48 OR2R1P-201ENST00000441404 914 ntBASIC14.93□□□□□ -0.02
ALFQ53S48 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.93□□□□□ -0.02
ALFQ53S48 AC125604.1-201ENST00000496255 707 ntBASIC14.93□□□□□ -0.02
ALFQ53S48 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.93□□□□□ -0.02
ALFQ53S48 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.93□□□□□ -0.02
ALFQ53S48 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.93□□□□□ -0.02
ALFQ53S48 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.93□□□□□ -0.02
ALFQ53S48 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ALFQ53S48 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.93□□□□□ -0.02
ALFQ53S48 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.93□□□□□ -0.02
ALFQ53S48 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.93□□□□□ -0.02
ALFQ53S48 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ALFQ53S48 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.93□□□□□ -0.02
ALFQ53S48 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.93□□□□□ -0.02
ALFQ53S48 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
ALFQ53S48 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALFQ53S48 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ALFQ53S48 TUBBP5-203ENST00000508529 1334 ntBASIC14.92□□□□□ -0.02
ALFQ53S48 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ALFQ53S48 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ALFQ53S48 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ALFQ53S48 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ALFQ53S48 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ALFQ53S48 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ALFQ53S48 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
ALFQ53S48 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.92□□□□□ -0.02
ALFQ53S48 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.92□□□□□ -0.02
ALFQ53S48 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ALFQ53S48 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.92□□□□□ -0.02
ALFQ53S48 RCC2P8-201ENST00000502779 1035 ntBASIC14.92□□□□□ -0.02
ALFQ53S48 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms