Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 TBC1D3J-201ENST00000620719 1426 ntBASIC19.91■□□□□ 0.78
CDCA8Q53HL2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 AC134698.3-201ENST00000523880 214 ntBASIC19.9■□□□□ 0.78
CDCA8Q53HL2 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 RHOQP1-201ENST00000555758 579 ntBASIC19.9■□□□□ 0.78
CDCA8Q53HL2 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 TUBB8P4-201ENST00000511806 1324 ntBASIC19.9■□□□□ 0.78
CDCA8Q53HL2 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 LINC01815-202ENST00000641468 1409 ntBASIC19.9■□□□□ 0.78
CDCA8Q53HL2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 AL022313.4-201ENST00000562756 2046 ntBASIC19.9■□□□□ 0.78
CDCA8Q53HL2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDCA8Q53HL2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDCA8Q53HL2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDCA8Q53HL2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDCA8Q53HL2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDCA8Q53HL2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDCA8Q53HL2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 BRD7P5-201ENST00000299197 1822 ntBASIC19.89■□□□□ 0.77
CDCA8Q53HL2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 AC103592.1-201ENST00000394513 664 ntBASIC19.89■□□□□ 0.77
CDCA8Q53HL2 SHMT1P1-201ENST00000419974 1312 ntBASIC19.89■□□□□ 0.77
CDCA8Q53HL2 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 MAGEA5-201ENST00000446757 942 ntBASIC19.89■□□□□ 0.77
CDCA8Q53HL2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 HSPA8P5-201ENST00000456928 2069 ntBASIC19.89■□□□□ 0.77
CDCA8Q53HL2 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 FAM45BP-202ENST00000592932 1624 ntBASIC19.89■□□□□ 0.77
CDCA8Q53HL2 AL606495.2-201ENST00000605867 535 ntBASIC19.89■□□□□ 0.77
CDCA8Q53HL2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDCA8Q53HL2 AC005912.2-201ENST00000619492 2400 ntBASIC19.88■□□□□ 0.77
CDCA8Q53HL2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDCA8Q53HL2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDCA8Q53HL2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDCA8Q53HL2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms