Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZC3H6P61129 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZC3H6P61129 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
ZC3H6P61129 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZC3H6P61129 ZNF436-AS1-201ENST00000335648 2547 ntBASIC19.1■□□□□ 0.65
ZC3H6P61129 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZC3H6P61129 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZC3H6P61129 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZC3H6P61129 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZC3H6P61129 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC19.1■□□□□ 0.65
ZC3H6P61129 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ZC3H6P61129 MIR4265-201ENST00000582152 99 ntBASIC19.1■□□□□ 0.65
ZC3H6P61129 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZC3H6P61129 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC19.1■□□□□ 0.65
ZC3H6P61129 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC19.1■□□□□ 0.65
ZC3H6P61129 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZC3H6P61129 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZC3H6P61129 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZC3H6P61129 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ZC3H6P61129 AC068587.6-202ENST00000641839 5619 ntBASIC19.1■□□□□ 0.65
ZC3H6P61129 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC19.1■□□□□ 0.65
ZC3H6P61129 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZC3H6P61129 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.1■□□□□ 0.65
ZC3H6P61129 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 AL365181.1-201ENST00000564032 1828 ntBASIC19.09■□□□□ 0.65
ZC3H6P61129 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
ZC3H6P61129 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ZC3H6P61129 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ZC3H6P61129 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ZC3H6P61129 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ZC3H6P61129 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC19.09■□□□□ 0.65
ZC3H6P61129 LINC00265-2P-201ENST00000413372 782 ntBASIC19.09■□□□□ 0.65
ZC3H6P61129 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC19.09■□□□□ 0.65
ZC3H6P61129 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC19.09■□□□□ 0.65
ZC3H6P61129 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
ZC3H6P61129 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ZC3H6P61129 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 AC068831.5-201ENST00000557387 328 ntBASIC19.09■□□□□ 0.65
ZC3H6P61129 HPX-213ENST00000615166 826 ntTSL 5 BASIC19.09■□□□□ 0.65
ZC3H6P61129 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.09■□□□□ 0.65
ZC3H6P61129 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ZC3H6P61129 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
ZC3H6P61129 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H6P61129 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.08■□□□□ 0.65
ZC3H6P61129 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H6P61129 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.08■□□□□ 0.65
ZC3H6P61129 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H6P61129 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H6P61129 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
ZC3H6P61129 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H6P61129 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H6P61129 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H6P61129 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
ZC3H6P61129 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H6P61129 ENPP7P8-202ENST00000527856 1345 ntBASIC19.08■□□□□ 0.65
ZC3H6P61129 AC132872.4-202ENST00000622924 2756 ntBASIC19.08■□□□□ 0.65
ZC3H6P61129 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ZC3H6P61129 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H6P61129 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H6P61129 CICP6-201ENST00000457191 2729 ntBASIC19.08■□□□□ 0.65
ZC3H6P61129 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H6P61129 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC19.08■□□□□ 0.64
ZC3H6P61129 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H6P61129 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC19.08■□□□□ 0.64
ZC3H6P61129 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC19.08■□□□□ 0.64
ZC3H6P61129 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H6P61129 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H6P61129 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H6P61129 RN7SL288P-201ENST00000490496 291 ntBASIC19.08■□□□□ 0.64
ZC3H6P61129 PRSS3P1-201ENST00000503996 742 ntBASIC19.08■□□□□ 0.64
ZC3H6P61129 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC19.08■□□□□ 0.64
ZC3H6P61129 CASP3-205ENST00000517513 964 ntTSL 5 BASIC19.08■□□□□ 0.64
ZC3H6P61129 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC19.08■□□□□ 0.64
ZC3H6P61129 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
ZC3H6P61129 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC19.08■□□□□ 0.64
ZC3H6P61129 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H6P61129 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H6P61129 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H6P61129 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC19.08■□□□□ 0.64
ZC3H6P61129 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC19.08■□□□□ 0.64
ZC3H6P61129 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H6P61129 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H6P61129 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H6P61129 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H6P61129 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms