Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
SPCS3P61009 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SPCS3P61009 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
SPCS3P61009 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SPCS3P61009 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC11.95□□□□□ -0.5
SPCS3P61009 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SPCS3P61009 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.95□□□□□ -0.5
SPCS3P61009 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SPCS3P61009 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.95□□□□□ -0.5
SPCS3P61009 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.95□□□□□ -0.5
SPCS3P61009 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.95□□□□□ -0.5
SPCS3P61009 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC11.95□□□□□ -0.5
SPCS3P61009 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.95□□□□□ -0.5
SPCS3P61009 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.95□□□□□ -0.5
SPCS3P61009 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 TREML5P-201ENST00000421694 576 ntBASIC11.95□□□□□ -0.5
SPCS3P61009 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.95□□□□□ -0.5
SPCS3P61009 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SPCS3P61009 FAM86GP-201ENST00000448322 971 ntBASIC11.95□□□□□ -0.5
SPCS3P61009 AL589987.1-201ENST00000453380 819 ntBASIC11.95□□□□□ -0.5
SPCS3P61009 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.95□□□□□ -0.5
SPCS3P61009 AC026434.2-201ENST00000506094 1078 ntBASIC11.95□□□□□ -0.5
SPCS3P61009 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.95□□□□□ -0.5
SPCS3P61009 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.95□□□□□ -0.5
SPCS3P61009 AC135586.1-201ENST00000539323 574 ntBASIC11.95□□□□□ -0.5
SPCS3P61009 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.95□□□□□ -0.5
SPCS3P61009 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.95□□□□□ -0.5
SPCS3P61009 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.95□□□□□ -0.5
SPCS3P61009 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.95□□□□□ -0.5
SPCS3P61009 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.95□□□□□ -0.5
SPCS3P61009 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.95□□□□□ -0.5
SPCS3P61009 AC007431.3-201ENST00000623221 587 ntBASIC11.95□□□□□ -0.5
SPCS3P61009 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.95□□□□□ -0.5
SPCS3P61009 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.95□□□□□ -0.5
SPCS3P61009 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SPCS3P61009 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.95□□□□□ -0.5
SPCS3P61009 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SPCS3P61009 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SPCS3P61009 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.95□□□□□ -0.5
SPCS3P61009 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPCS3P61009 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
SPCS3P61009 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.94□□□□□ -0.5
SPCS3P61009 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.94□□□□□ -0.5
SPCS3P61009 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SPCS3P61009 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SPCS3P61009 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SPCS3P61009 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 MRPL37P1-201ENST00000592451 1337 ntBASIC11.94□□□□□ -0.5
SPCS3P61009 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.94□□□□□ -0.5
SPCS3P61009 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.94□□□□□ -0.5
SPCS3P61009 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.94□□□□□ -0.5
SPCS3P61009 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC11.94□□□□□ -0.5
SPCS3P61009 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.94□□□□□ -0.5
SPCS3P61009 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC11.94□□□□□ -0.5
SPCS3P61009 AC009407.1-201ENST00000568958 598 ntBASIC11.94□□□□□ -0.5
SPCS3P61009 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.94□□□□□ -0.5
SPCS3P61009 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
SPCS3P61009 AC079781.4-201ENST00000641908 219 ntBASIC11.94□□□□□ -0.5
SPCS3P61009 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
SPCS3P61009 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SPCS3P61009 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SPCS3P61009 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms