Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH12P55289 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.63□□□□□ -0.23
CDH12P55289 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CDH12P55289 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH12P55289 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH12P55289 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDH12P55289 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH12P55289 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CDH12P55289 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH12P55289 AC236430.1-201ENST00000402231 743 ntBASIC13.63□□□□□ -0.23
CDH12P55289 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.63□□□□□ -0.23
CDH12P55289 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.63□□□□□ -0.23
CDH12P55289 AC002472.2-201ENST00000442739 958 ntBASIC13.63□□□□□ -0.23
CDH12P55289 FO681548.1-201ENST00000455617 1132 ntBASIC13.63□□□□□ -0.23
CDH12P55289 AC093433.1-201ENST00000458048 571 ntBASIC13.63□□□□□ -0.23
CDH12P55289 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CDH12P55289 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDH12P55289 AC131206.1-201ENST00000538078 1211 ntBASIC13.63□□□□□ -0.23
CDH12P55289 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH12P55289 WASH4P-201ENST00000564273 1246 ntBASIC13.63□□□□□ -0.23
CDH12P55289 AL096865.1-201ENST00000606796 927 ntBASIC13.63□□□□□ -0.23
CDH12P55289 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.63□□□□□ -0.23
CDH12P55289 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CDH12P55289 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH12P55289 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.63□□□□□ -0.23
CDH12P55289 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDH12P55289 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDH12P55289 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.63□□□□□ -0.23
CDH12P55289 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH12P55289 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH12P55289 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH12P55289 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.63□□□□□ -0.23
CDH12P55289 DGCR9-201ENST00000609630 2415 ntBASIC13.63□□□□□ -0.23
CDH12P55289 AC005562.1-201ENST00000583030 3219 ntBASIC13.63□□□□□ -0.23
CDH12P55289 COL6A4P2-202ENST00000504443 2753 ntBASIC13.63□□□□□ -0.23
CDH12P55289 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH12P55289 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH12P55289 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CDH12P55289 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDH12P55289 AC073548.1-201ENST00000624088 1882 ntBASIC13.63□□□□□ -0.23
CDH12P55289 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH12P55289 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.63□□□□□ -0.23
CDH12P55289 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH12P55289 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.63□□□□□ -0.23
CDH12P55289 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH12P55289 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.63□□□□□ -0.23
CDH12P55289 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.63□□□□□ -0.23
CDH12P55289 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDH12P55289 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CDH12P55289 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH12P55289 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDH12P55289 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH12P55289 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDH12P55289 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
CDH12P55289 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH12P55289 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH12P55289 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CDH12P55289 PIN1P1-201ENST00000412108 996 ntBASIC13.62□□□□□ -0.23
CDH12P55289 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.62□□□□□ -0.23
CDH12P55289 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CDH12P55289 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH12P55289 AC022137.2-201ENST00000503482 481 ntBASIC13.62□□□□□ -0.23
CDH12P55289 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH12P55289 SPCS2P1-201ENST00000561636 679 ntBASIC13.62□□□□□ -0.23
CDH12P55289 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH12P55289 AC140912.1-201ENST00000577171 1054 ntBASIC13.62□□□□□ -0.23
CDH12P55289 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDH12P55289 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CDH12P55289 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CDH12P55289 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH12P55289 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 AL157996.1-201ENST00000624684 2299 ntBASIC13.62□□□□□ -0.23
CDH12P55289 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CDH12P55289 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDH12P55289 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CDH12P55289 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDH12P55289 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH12P55289 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms