Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.34□□□□□ -0.43
NKX2-5P52952 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.34□□□□□ -0.43
NKX2-5P52952 HYMAI.1-201ENST00000620949 238 ntBASIC12.34□□□□□ -0.43
NKX2-5P52952 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.34□□□□□ -0.43
NKX2-5P52952 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NKX2-5P52952 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
NKX2-5P52952 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC12.34□□□□□ -0.43
NKX2-5P52952 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.34□□□□□ -0.43
NKX2-5P52952 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.34□□□□□ -0.43
NKX2-5P52952 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.34□□□□□ -0.43
NKX2-5P52952 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
NKX2-5P52952 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX2-5P52952 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.33□□□□□ -0.44
NKX2-5P52952 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
NKX2-5P52952 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX2-5P52952 AC009108.4-201ENST00000623284 2451 ntBASIC12.33□□□□□ -0.44
NKX2-5P52952 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX2-5P52952 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX2-5P52952 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
NKX2-5P52952 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.44
NKX2-5P52952 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
NKX2-5P52952 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX2-5P52952 ELK2BP-201ENST00000415014 1224 ntBASIC12.33□□□□□ -0.44
NKX2-5P52952 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.33□□□□□ -0.44
NKX2-5P52952 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.33□□□□□ -0.44
NKX2-5P52952 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.33□□□□□ -0.44
NKX2-5P52952 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 COX11P1-201ENST00000489116 835 ntBASIC12.33□□□□□ -0.44
NKX2-5P52952 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NKX2-5P52952 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.33□□□□□ -0.44
NKX2-5P52952 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX2-5P52952 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.33□□□□□ -0.44
NKX2-5P52952 AC074044.1-201ENST00000609673 707 ntBASIC12.33□□□□□ -0.44
NKX2-5P52952 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX2-5P52952 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 MSNP1-201ENST00000511640 1732 ntBASIC12.33□□□□□ -0.44
NKX2-5P52952 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 NLRP2-209ENST00000537859 3507 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
NKX2-5P52952 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
NKX2-5P52952 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX2-5P52952 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-5P52952 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 CICP2-201ENST00000420675 2328 ntBASIC12.32□□□□□ -0.44
NKX2-5P52952 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NKX2-5P52952 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms