Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC14.31□□□□□ -0.12
GTF2A1P52655 AL354702.1-201ENST00000442006 1960 ntBASIC14.31□□□□□ -0.12
GTF2A1P52655 AC090643.2-201ENST00000623442 2029 ntBASIC14.31□□□□□ -0.12
GTF2A1P52655 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.3□□□□□ -0.12
GTF2A1P52655 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC14.3□□□□□ -0.12
GTF2A1P52655 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.3□□□□□ -0.12
GTF2A1P52655 AC026271.4-201ENST00000578214 1833 ntBASIC14.3□□□□□ -0.12
GTF2A1P52655 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
GTF2A1P52655 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.3□□□□□ -0.12
GTF2A1P52655 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC14.3□□□□□ -0.12
GTF2A1P52655 HMGA1P7-201ENST00000406908 502 ntBASIC14.3□□□□□ -0.12
GTF2A1P52655 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.3□□□□□ -0.12
GTF2A1P52655 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
GTF2A1P52655 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.3□□□□□ -0.12
GTF2A1P52655 MIR4515-201ENST00000584082 81 ntBASIC14.3□□□□□ -0.12
GTF2A1P52655 AC021097.1-201ENST00000607902 574 ntBASIC14.3□□□□□ -0.12
GTF2A1P52655 AC091076.1-201ENST00000610741 619 ntBASIC14.3□□□□□ -0.12
GTF2A1P52655 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.3□□□□□ -0.12
GTF2A1P52655 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC14.3□□□□□ -0.12
GTF2A1P52655 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
GTF2A1P52655 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.3□□□□□ -0.12
GTF2A1P52655 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.3□□□□□ -0.12
GTF2A1P52655 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GTF2A1P52655 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
GTF2A1P52655 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.3□□□□□ -0.12
GTF2A1P52655 NT5C3AP1-202ENST00000441170 1663 ntBASIC14.3□□□□□ -0.12
GTF2A1P52655 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC14.3□□□□□ -0.12
GTF2A1P52655 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GTF2A1P52655 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
GTF2A1P52655 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GTF2A1P52655 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC14.29□□□□□ -0.12
GTF2A1P52655 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC14.29□□□□□ -0.12
GTF2A1P52655 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC14.29□□□□□ -0.12
GTF2A1P52655 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.29□□□□□ -0.12
GTF2A1P52655 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
GTF2A1P52655 TP73-203ENST00000357733 4899 ntTSL 5 BASIC14.29□□□□□ -0.12
GTF2A1P52655 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.29□□□□□ -0.12
GTF2A1P52655 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
GTF2A1P52655 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.29□□□□□ -0.12
GTF2A1P52655 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 AC136632.2-201ENST00000512891 861 ntBASIC14.29□□□□□ -0.12
GTF2A1P52655 IGHV3-65-201ENST00000523210 341 ntBASIC14.29□□□□□ -0.12
GTF2A1P52655 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.29□□□□□ -0.12
GTF2A1P52655 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.29□□□□□ -0.12
GTF2A1P52655 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.29□□□□□ -0.12
GTF2A1P52655 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.29□□□□□ -0.12
GTF2A1P52655 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.29□□□□□ -0.12
GTF2A1P52655 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.29□□□□□ -0.12
GTF2A1P52655 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.29□□□□□ -0.12
GTF2A1P52655 OR7E47P-204ENST00000575924 449 ntBASIC14.29□□□□□ -0.12
GTF2A1P52655 AL031055.1-201ENST00000606362 631 ntBASIC14.29□□□□□ -0.12
GTF2A1P52655 ACTL9-202ENST00000612068 1252 ntBASIC14.29□□□□□ -0.12
GTF2A1P52655 REXO1L6P-202ENST00000619970 1078 ntBASIC14.29□□□□□ -0.12
GTF2A1P52655 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
GTF2A1P52655 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
GTF2A1P52655 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.29□□□□□ -0.12
GTF2A1P52655 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.29□□□□□ -0.12
GTF2A1P52655 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.29□□□□□ -0.12
GTF2A1P52655 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
GTF2A1P52655 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC14.29□□□□□ -0.12
GTF2A1P52655 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
GTF2A1P52655 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.29□□□□□ -0.12
GTF2A1P52655 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms