Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK7P50613 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.97■□□□□ 0.15
CDK7P50613 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
CDK7P50613 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CDK7P50613 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK7P50613 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK7P50613 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.97■□□□□ 0.15
CDK7P50613 OR8T1P-201ENST00000421347 918 ntBASIC15.97■□□□□ 0.15
CDK7P50613 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.97■□□□□ 0.15
CDK7P50613 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.97■□□□□ 0.15
CDK7P50613 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK7P50613 RN7SL357P-201ENST00000581065 298 ntBASIC15.97■□□□□ 0.15
CDK7P50613 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.97■□□□□ 0.15
CDK7P50613 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.97■□□□□ 0.15
CDK7P50613 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.97■□□□□ 0.15
CDK7P50613 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK7P50613 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.97■□□□□ 0.15
CDK7P50613 AC002044.2-201ENST00000624910 970 ntBASIC15.97■□□□□ 0.15
CDK7P50613 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CDK7P50613 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK7P50613 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CDK7P50613 AC006372.4-201ENST00000624122 1543 ntBASIC15.97■□□□□ 0.15
CDK7P50613 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK7P50613 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK7P50613 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK7P50613 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK7P50613 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.96■□□□□ 0.15
CDK7P50613 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CDK7P50613 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
CDK7P50613 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.96■□□□□ 0.15
CDK7P50613 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CDK7P50613 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 AC023908.3-201ENST00000564211 3047 ntBASIC15.96■□□□□ 0.15
CDK7P50613 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.96■□□□□ 0.15
CDK7P50613 KHSRPP1-201ENST00000427983 1768 ntBASIC15.96■□□□□ 0.15
CDK7P50613 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.96■□□□□ 0.15
CDK7P50613 AC021305.1-201ENST00000520656 1514 ntBASIC15.96■□□□□ 0.15
CDK7P50613 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 RN7SKP109-201ENST00000410592 316 ntBASIC15.96■□□□□ 0.15
CDK7P50613 AL135901.1-201ENST00000451812 333 ntBASIC15.96■□□□□ 0.15
CDK7P50613 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC15.96■□□□□ 0.15
CDK7P50613 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDK7P50613 OR5BD1P-201ENST00000532527 817 ntBASIC15.96■□□□□ 0.15
CDK7P50613 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.96■□□□□ 0.15
CDK7P50613 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.96■□□□□ 0.15
CDK7P50613 ETV2-207ENST00000619399 994 ntTSL 5 BASIC15.96■□□□□ 0.15
CDK7P50613 AL591471.1-201ENST00000621855 229 ntBASIC15.96■□□□□ 0.15
CDK7P50613 AC011471.3-201ENST00000623576 402 ntBASIC15.96■□□□□ 0.15
CDK7P50613 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CDK7P50613 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.96■□□□□ 0.15
CDK7P50613 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.96■□□□□ 0.15
CDK7P50613 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.96■□□□□ 0.15
CDK7P50613 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.96■□□□□ 0.15
CDK7P50613 C8orf49-201ENST00000525043 1968 ntBASIC15.96■□□□□ 0.15
CDK7P50613 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK7P50613 AC006504.5-208ENST00000588784 2401 ntBASIC15.96■□□□□ 0.15
CDK7P50613 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
CDK7P50613 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.96■□□□□ 0.14
CDK7P50613 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDK7P50613 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK7P50613 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDK7P50613 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK7P50613 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDK7P50613 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK7P50613 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK7P50613 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDK7P50613 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.95■□□□□ 0.14
CDK7P50613 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK7P50613 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK7P50613 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK7P50613 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms