Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1A1P48729 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CSNK1A1P48729 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1A1P48729 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13□□□□□ -0.33
CSNK1A1P48729 AC011498.7-201ENST00000624986 2027 ntBASIC13□□□□□ -0.33
CSNK1A1P48729 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13□□□□□ -0.33
CSNK1A1P48729 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 MIR658-201ENST00000385210 100 ntBASIC12.99□□□□□ -0.33
CSNK1A1P48729 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 FAM21FP-201ENST00000426241 1131 ntBASIC12.99□□□□□ -0.33
CSNK1A1P48729 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 MIR4741-201ENST00000579822 90 ntBASIC12.99□□□□□ -0.33
CSNK1A1P48729 AC239800.4-201ENST00000603712 296 ntBASIC12.99□□□□□ -0.33
CSNK1A1P48729 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 AC244157.2-201ENST00000616239 1006 ntBASIC12.99□□□□□ -0.33
CSNK1A1P48729 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CSNK1A1P48729 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1A1P48729 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms