Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
FDFT1P37268 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.88□□□□□ -0.03
FDFT1P37268 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
FDFT1P37268 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
FDFT1P37268 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
FDFT1P37268 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
FDFT1P37268 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
FDFT1P37268 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.87□□□□□ -0.03
FDFT1P37268 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
FDFT1P37268 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.87□□□□□ -0.03
FDFT1P37268 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.87□□□□□ -0.03
FDFT1P37268 TMEM14DP-201ENST00000422205 345 ntBASIC14.87□□□□□ -0.03
FDFT1P37268 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.87□□□□□ -0.03
FDFT1P37268 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.87□□□□□ -0.03
FDFT1P37268 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.87□□□□□ -0.03
FDFT1P37268 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.87□□□□□ -0.03
FDFT1P37268 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.87□□□□□ -0.03
FDFT1P37268 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.87□□□□□ -0.03
FDFT1P37268 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.87□□□□□ -0.03
FDFT1P37268 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
FDFT1P37268 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
FDFT1P37268 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.87□□□□□ -0.03
FDFT1P37268 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
FDFT1P37268 AC126335.2-201ENST00000623362 4637 ntBASIC14.87□□□□□ -0.03
FDFT1P37268 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.87□□□□□ -0.03
FDFT1P37268 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FDFT1P37268 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
FDFT1P37268 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.86□□□□□ -0.03
FDFT1P37268 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.86□□□□□ -0.03
FDFT1P37268 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
FDFT1P37268 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
FDFT1P37268 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.86□□□□□ -0.03
FDFT1P37268 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.86□□□□□ -0.03
FDFT1P37268 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 AC010141.1-201ENST00000411585 623 ntBASIC14.86□□□□□ -0.03
FDFT1P37268 KRT43P-201ENST00000434019 910 ntBASIC14.86□□□□□ -0.03
FDFT1P37268 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 AL355994.2-201ENST00000447882 704 ntBASIC14.86□□□□□ -0.03
FDFT1P37268 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
FDFT1P37268 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.86□□□□□ -0.03
FDFT1P37268 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.86□□□□□ -0.03
FDFT1P37268 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.86□□□□□ -0.03
FDFT1P37268 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
FDFT1P37268 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.86□□□□□ -0.03
FDFT1P37268 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
FDFT1P37268 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms