Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.96□□□□□ -0.33
CD40LGP29965 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD40LGP29965 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CD40LGP29965 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CD40LGP29965 AC102953.2-201ENST00000609755 3026 ntBASIC12.96□□□□□ -0.33
CD40LGP29965 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.96□□□□□ -0.33
CD40LGP29965 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD40LGP29965 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD40LGP29965 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD40LGP29965 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CD40LGP29965 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD40LGP29965 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CD40LGP29965 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CD40LGP29965 AP000347.1-202ENST00000435868 847 ntBASIC12.96□□□□□ -0.33
CD40LGP29965 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.96□□□□□ -0.33
CD40LGP29965 CEND1P1-201ENST00000451006 455 ntBASIC12.96□□□□□ -0.33
CD40LGP29965 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.96□□□□□ -0.33
CD40LGP29965 RNA5SP410-201ENST00000516285 106 ntBASIC12.96□□□□□ -0.33
CD40LGP29965 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.96□□□□□ -0.33
CD40LGP29965 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.96□□□□□ -0.33
CD40LGP29965 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.96□□□□□ -0.33
CD40LGP29965 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.96□□□□□ -0.33
CD40LGP29965 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CD40LGP29965 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.96□□□□□ -0.33
CD40LGP29965 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CD40LGP29965 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.96□□□□□ -0.33
CD40LGP29965 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CD40LGP29965 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
CD40LGP29965 AC022497.1-201ENST00000624916 3691 ntBASIC12.96□□□□□ -0.34
CD40LGP29965 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD40LGP29965 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.96□□□□□ -0.34
CD40LGP29965 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD40LGP29965 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD40LGP29965 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.96□□□□□ -0.34
CD40LGP29965 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CD40LGP29965 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD40LGP29965 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CD40LGP29965 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CD40LGP29965 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
CD40LGP29965 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD40LGP29965 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
CD40LGP29965 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD40LGP29965 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CD40LGP29965 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
CD40LGP29965 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CD40LGP29965 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.95□□□□□ -0.34
CD40LGP29965 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CD40LGP29965 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CD40LGP29965 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CD40LGP29965 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CD40LGP29965 AC092364.2-202ENST00000597012 1073 ntBASIC12.95□□□□□ -0.34
CD40LGP29965 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 AC011700.1-201ENST00000610409 2627 ntBASIC12.95□□□□□ -0.34
CD40LGP29965 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.95□□□□□ -0.34
CD40LGP29965 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.95□□□□□ -0.34
CD40LGP29965 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CD40LGP29965 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CD40LGP29965 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 TNRC18P1-201ENST00000502875 3650 ntBASIC12.95□□□□□ -0.34
CD40LGP29965 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CD40LGP29965 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD40LGP29965 AL445250.1-201ENST00000641671 2259 ntBASIC12.95□□□□□ -0.34
CD40LGP29965 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.95□□□□□ -0.34
CD40LGP29965 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.95□□□□□ -0.34
CD40LGP29965 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms