Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB4AP20338 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
RAB4AP20338 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB4AP20338 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB4AP20338 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RAB4AP20338 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB4AP20338 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB4AP20338 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
RAB4AP20338 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.23□□□□□ -0.61
RAB4AP20338 AC105233.2-201ENST00000523697 349 ntBASIC11.23□□□□□ -0.61
RAB4AP20338 AF228730.5-201ENST00000530288 346 ntBASIC11.23□□□□□ -0.61
RAB4AP20338 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB4AP20338 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
RAB4AP20338 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.23□□□□□ -0.61
RAB4AP20338 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB4AP20338 AC010507.1-201ENST00000633895 436 ntBASIC11.23□□□□□ -0.61
RAB4AP20338 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RAB4AP20338 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 PCDHA4-204ENST00000618834 10557 ntBASIC11.23□□□□□ -0.61
RAB4AP20338 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RAB4AP20338 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
RAB4AP20338 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB4AP20338 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB4AP20338 FOXO1B-201ENST00000504678 1527 ntBASIC11.23□□□□□ -0.61
RAB4AP20338 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
RAB4AP20338 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
RAB4AP20338 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
RAB4AP20338 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB4AP20338 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
RAB4AP20338 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 BLZF1-201ENST00000329281 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 CSPG4P12-201ENST00000558282 4853 ntBASIC11.23□□□□□ -0.61
RAB4AP20338 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB4AP20338 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RAB4AP20338 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
RAB4AP20338 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB4AP20338 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
RAB4AP20338 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.22□□□□□ -0.61
RAB4AP20338 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
RAB4AP20338 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
RAB4AP20338 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB4AP20338 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
RAB4AP20338 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.22□□□□□ -0.61
RAB4AP20338 HCG4B-203ENST00000450128 991 ntBASIC11.22□□□□□ -0.61
RAB4AP20338 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB4AP20338 RNA5SP410-201ENST00000516285 106 ntBASIC11.22□□□□□ -0.61
RAB4AP20338 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.22□□□□□ -0.61
RAB4AP20338 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.22□□□□□ -0.61
RAB4AP20338 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms