Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 Z93015.1-201ENST00000451718 390 ntBASIC14.71□□□□□ -0.05
HLA-DPA1P20036 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 AC100827.2-201ENST00000563214 1194 ntBASIC14.71□□□□□ -0.05
HLA-DPA1P20036 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 AC104506.1-201ENST00000609247 429 ntBASIC14.71□□□□□ -0.05
HLA-DPA1P20036 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.71□□□□□ -0.05
HLA-DPA1P20036 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 AC136759.1-202ENST00000530858 2194 ntBASIC14.71□□□□□ -0.05
HLA-DPA1P20036 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DPA1P20036 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
HLA-DPA1P20036 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DPA1P20036 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DPA1P20036 AC016397.2-201ENST00000624848 1985 ntBASIC14.71□□□□□ -0.06
HLA-DPA1P20036 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DPA1P20036 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DPA1P20036 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DPA1P20036 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.71□□□□□ -0.06
HLA-DPA1P20036 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DPA1P20036 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 MTX1P1-201ENST00000440904 838 ntBASIC14.7□□□□□ -0.06
HLA-DPA1P20036 AC012441.2-201ENST00000444843 739 ntBASIC14.7□□□□□ -0.06
HLA-DPA1P20036 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 MIR4783-201ENST00000580343 82 ntBASIC14.7□□□□□ -0.06
HLA-DPA1P20036 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 AC009884.2-201ENST00000603110 324 ntBASIC14.7□□□□□ -0.06
HLA-DPA1P20036 AL162426.1-201ENST00000624141 743 ntBASIC14.7□□□□□ -0.06
HLA-DPA1P20036 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 TMBIM7P-202ENST00000641474 1516 ntBASIC14.7□□□□□ -0.06
HLA-DPA1P20036 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPA1P20036 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms