Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.88■□□□□ 0.29
ERCC3P19447 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.88■□□□□ 0.29
ERCC3P19447 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.88■□□□□ 0.29
ERCC3P19447 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 COX6A1P2-201ENST00000620597 330 ntBASIC16.88■□□□□ 0.29
ERCC3P19447 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
ERCC3P19447 AC051619.9-201ENST00000623237 597 ntBASIC16.88■□□□□ 0.29
ERCC3P19447 AC011491.1-203ENST00000637688 543 ntBASIC16.88■□□□□ 0.29
ERCC3P19447 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ERCC3P19447 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 FAM90A2P-201ENST00000511144 1395 ntBASIC16.88■□□□□ 0.29
ERCC3P19447 FAM90A25P-201ENST00000528404 1395 ntBASIC16.88■□□□□ 0.29
ERCC3P19447 CAP2P1-201ENST00000557743 1390 ntBASIC16.88■□□□□ 0.29
ERCC3P19447 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.88■□□□□ 0.29
ERCC3P19447 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
ERCC3P19447 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
ERCC3P19447 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.87■□□□□ 0.29
ERCC3P19447 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.87■□□□□ 0.29
ERCC3P19447 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ERCC3P19447 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ERCC3P19447 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.87■□□□□ 0.29
ERCC3P19447 MIR600HG-201ENST00000449175 5984 ntBASIC16.87■□□□□ 0.29
ERCC3P19447 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.87■□□□□ 0.29
ERCC3P19447 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.87■□□□□ 0.29
ERCC3P19447 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 RPL8P2-201ENST00000430538 502 ntBASIC16.87■□□□□ 0.29
ERCC3P19447 AC008723.1-201ENST00000506922 207 ntBASIC16.87■□□□□ 0.29
ERCC3P19447 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.87■□□□□ 0.29
ERCC3P19447 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 MIR6769A-201ENST00000617340 73 ntBASIC16.87■□□□□ 0.29
ERCC3P19447 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.87■□□□□ 0.29
ERCC3P19447 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.87■□□□□ 0.29
ERCC3P19447 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.87■□□□□ 0.29
ERCC3P19447 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.87■□□□□ 0.29
ERCC3P19447 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ERCC3P19447 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 FRMPD2B-201ENST00000431305 1347 ntBASIC16.87■□□□□ 0.29
ERCC3P19447 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.87■□□□□ 0.29
ERCC3P19447 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC3P19447 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.87■□□□□ 0.29
ERCC3P19447 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.87■□□□□ 0.29
ERCC3P19447 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.87■□□□□ 0.29
ERCC3P19447 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC3P19447 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ERCC3P19447 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ERCC3P19447 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ERCC3P19447 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.86■□□□□ 0.29
ERCC3P19447 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ERCC3P19447 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 AC026320.2-201ENST00000434379 478 ntBASIC16.86■□□□□ 0.29
ERCC3P19447 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC3P19447 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC3P19447 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 RBM8B-201ENST00000555532 525 ntBASIC16.86■□□□□ 0.29
ERCC3P19447 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC3P19447 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC3P19447 AC103810.10-201ENST00000606504 343 ntBASIC16.86■□□□□ 0.29
ERCC3P19447 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC3P19447 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ERCC3P19447 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ERCC3P19447 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms