Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 CYP4F23P-201ENST00000593402 1579 ntBASIC14.97□□□□□ -0.01
ERCC2P18074 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 GRK6P1-201ENST00000400595 1711 ntBASIC14.97□□□□□ -0.01
ERCC2P18074 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
ERCC2P18074 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC2P18074 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ERCC2P18074 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC2P18074 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.96□□□□□ -0.01
ERCC2P18074 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC2P18074 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ERCC2P18074 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.96□□□□□ -0.01
ERCC2P18074 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC2P18074 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ERCC2P18074 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ERCC2P18074 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC2P18074 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC2P18074 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ERCC2P18074 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC2P18074 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.96□□□□□ -0.01
ERCC2P18074 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.96□□□□□ -0.01
ERCC2P18074 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ERCC2P18074 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC2P18074 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
ERCC2P18074 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.96□□□□□ -0.01
ERCC2P18074 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.96□□□□□ -0.01
ERCC2P18074 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC2P18074 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.96□□□□□ -0.01
ERCC2P18074 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.96□□□□□ -0.01
ERCC2P18074 AC104982.3-201ENST00000581995 514 ntBASIC14.96□□□□□ -0.01
ERCC2P18074 AC005324.6-201ENST00000587972 613 ntBASIC14.96□□□□□ -0.01
ERCC2P18074 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.96□□□□□ -0.01
ERCC2P18074 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.96□□□□□ -0.01
ERCC2P18074 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC2P18074 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC2P18074 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ERCC2P18074 TCAM1P-207ENST00000485295 1537 ntBASIC14.96□□□□□ -0.02
ERCC2P18074 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ERCC2P18074 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ERCC2P18074 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.96□□□□□ -0.02
ERCC2P18074 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ERCC2P18074 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ERCC2P18074 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
ERCC2P18074 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ERCC2P18074 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ERCC2P18074 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
ERCC2P18074 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.96□□□□□ -0.02
ERCC2P18074 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 AL022313.4-201ENST00000562756 2046 ntBASIC14.95□□□□□ -0.02
ERCC2P18074 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ERCC2P18074 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.95□□□□□ -0.02
ERCC2P18074 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ERCC2P18074 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ERCC2P18074 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.95□□□□□ -0.02
ERCC2P18074 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ERCC2P18074 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.95□□□□□ -0.02
ERCC2P18074 RPL18P13-201ENST00000478088 569 ntBASIC14.95□□□□□ -0.02
ERCC2P18074 AC006122.1-201ENST00000493323 440 ntBASIC14.95□□□□□ -0.02
ERCC2P18074 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.95□□□□□ -0.02
ERCC2P18074 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.95□□□□□ -0.02
ERCC2P18074 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.95□□□□□ -0.02
ERCC2P18074 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.95□□□□□ -0.02
ERCC2P18074 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.95□□□□□ -0.02
ERCC2P18074 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.95□□□□□ -0.02
ERCC2P18074 AL023803.2-201ENST00000620080 638 ntBASIC14.95□□□□□ -0.02
ERCC2P18074 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.95□□□□□ -0.02
ERCC2P18074 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.95□□□□□ -0.02
ERCC2P18074 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.95□□□□□ -0.02
ERCC2P18074 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ERCC2P18074 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms