Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 AC026316.1-201ENST00000398900 414 ntBASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 RPS2P36-201ENST00000456516 831 ntBASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 AC008723.1-201ENST00000506922 207 ntBASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 KRT8P28-201ENST00000433288 1390 ntBASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 FAM90A2P-201ENST00000511144 1395 ntBASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 FAM90A25P-201ENST00000528404 1395 ntBASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 MIR33B-201ENST00000385104 96 ntBASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 KRT18P36-201ENST00000411618 1276 ntBASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 MPRIPP1-201ENST00000452433 1089 ntBASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 IGLV3-15-201ENST00000518356 244 ntBASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 SPCS2P2-201ENST00000603270 608 ntBASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 MIR6769A-201ENST00000617340 73 ntBASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 AC103691.2-201ENST00000618824 433 ntBASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 AC018629.1-201ENST00000623381 1736 ntBASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40ALP0C0E4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms