Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CD48P09326 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.07■□□□□ 0
CD48P09326 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CD48P09326 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CD48P09326 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.06■□□□□ 0
CD48P09326 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.06■□□□□ 0
CD48P09326 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 MBLAC2-202ENST00000514906 1936 ntBASIC15.06■□□□□ 0
CD48P09326 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.06■□□□□ 0
CD48P09326 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CD48P09326 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.06■□□□□ 0
CD48P09326 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.06■□□□□ 0
CD48P09326 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.06■□□□□ 0
CD48P09326 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.06■□□□□ 0
CD48P09326 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.06■□□□□ 0
CD48P09326 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.06■□□□□ 0
CD48P09326 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 AC023794.5-201ENST00000564380 2157 ntBASIC15.06■□□□□ 0
CD48P09326 AC063926.2-201ENST00000623766 1308 ntBASIC15.06■□□□□ 0
CD48P09326 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.06■□□□□ 0
CD48P09326 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
CD48P09326 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CD48P09326 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.06■□□□□ 0
CD48P09326 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CD48P09326 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD48P09326 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.06■□□□□ 0
CD48P09326 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CD48P09326 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
CD48P09326 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.05■□□□□ 0
CD48P09326 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD48P09326 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CD48P09326 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CD48P09326 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.05■□□□□ 0
CD48P09326 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CD48P09326 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD48P09326 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD48P09326 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD48P09326 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.05■□□□□ -0
CD48P09326 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.05■□□□□ -0
CD48P09326 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.05■□□□□ -0
CD48P09326 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.05■□□□□ -0
CD48P09326 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.05■□□□□ -0
CD48P09326 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.05■□□□□ -0
CD48P09326 Z98259.2-201ENST00000641583 609 ntBASIC15.05■□□□□ -0
CD48P09326 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.05■□□□□ -0
CD48P09326 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.05■□□□□ -0
CD48P09326 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CD48P09326 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CD48P09326 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.05■□□□□ -0
CD48P09326 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CD48P09326 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CD48P09326 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.04■□□□□ -0
CD48P09326 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.04■□□□□ -0
CD48P09326 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.04■□□□□ -0
CD48P09326 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.04■□□□□ -0
CD48P09326 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.04■□□□□ -0
CD48P09326 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CD48P09326 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms