Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.57□□□□□ -0.08
MMP2P08253 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
MMP2P08253 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
MMP2P08253 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
MMP2P08253 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.57□□□□□ -0.08
MMP2P08253 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.57□□□□□ -0.08
MMP2P08253 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
MMP2P08253 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP2P08253 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
MMP2P08253 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP2P08253 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP2P08253 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
MMP2P08253 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
MMP2P08253 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.56□□□□□ -0.08
MMP2P08253 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.56□□□□□ -0.08
MMP2P08253 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.56□□□□□ -0.08
MMP2P08253 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP2P08253 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP2P08253 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
MMP2P08253 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP2P08253 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 AL022328.3-201ENST00000607943 679 ntBASIC14.56□□□□□ -0.08
MMP2P08253 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP2P08253 AL157813.1-201ENST00000612996 587 ntBASIC14.56□□□□□ -0.08
MMP2P08253 AL591471.1-201ENST00000621855 229 ntBASIC14.56□□□□□ -0.08
MMP2P08253 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.56□□□□□ -0.08
MMP2P08253 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP2P08253 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP2P08253 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP2P08253 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MMP2P08253 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP2P08253 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.55□□□□□ -0.08
MMP2P08253 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP2P08253 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP2P08253 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP2P08253 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP2P08253 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
MMP2P08253 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.55□□□□□ -0.08
MMP2P08253 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP2P08253 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP2P08253 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MMP2P08253 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.55□□□□□ -0.08
MMP2P08253 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP2P08253 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP2P08253 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.55□□□□□ -0.08
MMP2P08253 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
MMP2P08253 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.55□□□□□ -0.08
MMP2P08253 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.55□□□□□ -0.08
MMP2P08253 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP2P08253 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.55□□□□□ -0.08
MMP2P08253 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.55□□□□□ -0.08
MMP2P08253 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.55□□□□□ -0.08
MMP2P08253 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP2P08253 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP2P08253 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP2P08253 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP2P08253 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP2P08253 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP2P08253 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MMP2P08253 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.55□□□□□ -0.08
MMP2P08253 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.55□□□□□ -0.08
MMP2P08253 AL136295.7-201ENST00000619226 1200 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms