Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM2P07951 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM2P07951 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM2P07951 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TPM2P07951 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM2P07951 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 LPO-204ENST00000543544 2350 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM2P07951 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 TCAM1P-207ENST00000485295 1537 ntBASIC16.66■□□□□ 0.26
TPM2P07951 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM2P07951 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM2P07951 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TPM2P07951 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TPM2P07951 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TPM2P07951 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.66■□□□□ 0.26
TPM2P07951 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.66■□□□□ 0.26
TPM2P07951 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
TPM2P07951 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM2P07951 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 AC090505.1-201ENST00000430515 1834 ntBASIC16.66■□□□□ 0.26
TPM2P07951 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM2P07951 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TPM2P07951 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TPM2P07951 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC16.65■□□□□ 0.26
TPM2P07951 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TPM2P07951 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TPM2P07951 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.65■□□□□ 0.26
TPM2P07951 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TPM2P07951 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TPM2P07951 MIR1233-2-201ENST00000408138 82 ntBASIC16.65■□□□□ 0.26
TPM2P07951 MIR1233-1-201ENST00000408722 82 ntBASIC16.65■□□□□ 0.26
TPM2P07951 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.65■□□□□ 0.26
TPM2P07951 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.65■□□□□ 0.26
TPM2P07951 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.65■□□□□ 0.26
TPM2P07951 TREML5P-201ENST00000421694 576 ntBASIC16.65■□□□□ 0.26
TPM2P07951 AC241585.1-201ENST00000433527 519 ntBASIC16.65■□□□□ 0.26
TPM2P07951 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.65■□□□□ 0.26
TPM2P07951 AC097493.3-201ENST00000509725 367 ntBASIC16.65■□□□□ 0.26
TPM2P07951 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.65■□□□□ 0.26
TPM2P07951 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.65■□□□□ 0.26
TPM2P07951 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.65■□□□□ 0.26
TPM2P07951 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.65■□□□□ 0.26
TPM2P07951 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.65■□□□□ 0.26
TPM2P07951 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 AL590560.3-201ENST00000623350 461 ntBASIC16.65■□□□□ 0.26
TPM2P07951 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.65■□□□□ 0.26
TPM2P07951 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TPM2P07951 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.65■□□□□ 0.26
TPM2P07951 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.65■□□□□ 0.26
TPM2P07951 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC16.65■□□□□ 0.26
TPM2P07951 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TPM2P07951 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TPM2P07951 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC16.65■□□□□ 0.26
TPM2P07951 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC16.65■□□□□ 0.26
TPM2P07951 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 KHSRPP1-201ENST00000427983 1768 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms