Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
RETP07949 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.67□□□□□ -0.06
RETP07949 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.67□□□□□ -0.06
RETP07949 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.67□□□□□ -0.06
RETP07949 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.67□□□□□ -0.06
RETP07949 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.67□□□□□ -0.06
RETP07949 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.67□□□□□ -0.06
RETP07949 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.67□□□□□ -0.06
RETP07949 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.67□□□□□ -0.06
RETP07949 DUTP3-201ENST00000450025 415 ntBASIC14.67□□□□□ -0.06
RETP07949 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.67□□□□□ -0.06
RETP07949 AC024293.1-201ENST00000467930 498 ntBASIC14.67□□□□□ -0.06
RETP07949 RN7SL81P-201ENST00000493781 261 ntBASIC14.67□□□□□ -0.06
RETP07949 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.67□□□□□ -0.06
RETP07949 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.67□□□□□ -0.06
RETP07949 AC012158.2-201ENST00000536546 354 ntBASIC14.67□□□□□ -0.06
RETP07949 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RETP07949 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.67□□□□□ -0.06
RETP07949 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC14.67□□□□□ -0.06
RETP07949 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
RETP07949 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RETP07949 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.67□□□□□ -0.06
RETP07949 LINC00431-202ENST00000636375 159 ntBASIC14.67□□□□□ -0.06
RETP07949 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
RETP07949 AC090502.4-201ENST00000551714 1386 ntBASIC14.67□□□□□ -0.06
RETP07949 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RETP07949 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.67□□□□□ -0.06
RETP07949 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RETP07949 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RETP07949 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RETP07949 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 AC011840.2-201ENST00000563063 1520 ntBASIC14.66□□□□□ -0.06
RETP07949 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.66□□□□□ -0.06
RETP07949 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RETP07949 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.66□□□□□ -0.06
RETP07949 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.66□□□□□ -0.06
RETP07949 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.66□□□□□ -0.06
RETP07949 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RETP07949 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RETP07949 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
RETP07949 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
RETP07949 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.66□□□□□ -0.06
RETP07949 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RETP07949 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 HIST2H2BA-201ENST00000412169 381 ntBASIC14.66□□□□□ -0.06
RETP07949 AL807761.2-201ENST00000422849 729 ntBASIC14.66□□□□□ -0.06
RETP07949 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.66□□□□□ -0.06
RETP07949 NDUFS6P1-201ENST00000485187 316 ntBASIC14.66□□□□□ -0.06
RETP07949 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.66□□□□□ -0.06
RETP07949 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC14.66□□□□□ -0.06
RETP07949 TMCO5B-205ENST00000530020 894 ntBASIC14.66□□□□□ -0.06
RETP07949 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.66□□□□□ -0.06
RETP07949 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.66□□□□□ -0.06
RETP07949 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RETP07949 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.66□□□□□ -0.06
RETP07949 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.66□□□□□ -0.06
RETP07949 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RETP07949 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RETP07949 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RETP07949 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RETP07949 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RETP07949 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 REXO1L2P-201ENST00000425429 2069 ntBASIC14.65□□□□□ -0.06
RETP07949 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.65□□□□□ -0.06
RETP07949 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RETP07949 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms