Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.29□□□□□ -0.28
P04436 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.29□□□□□ -0.28
P04436 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.29□□□□□ -0.28
P04436 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.29□□□□□ -0.28
P04436 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.29□□□□□ -0.28
P04436 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.29□□□□□ -0.28
P04436 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.29□□□□□ -0.28
P04436 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.29□□□□□ -0.28
P04436 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.29□□□□□ -0.28
P04436 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.29□□□□□ -0.28
P04436 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
P04436 AC024681.1-201ENST00000521917 487 ntBASIC13.29□□□□□ -0.28
P04436 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.29□□□□□ -0.28
P04436 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.29□□□□□ -0.28
P04436 PGAM1P5-201ENST00000548011 764 ntBASIC13.29□□□□□ -0.28
P04436 SORD2P-201ENST00000558556 1069 ntBASIC13.29□□□□□ -0.28
P04436 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.29□□□□□ -0.28
P04436 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.29□□□□□ -0.28
P04436 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.29□□□□□ -0.28
P04436 AL157813.1-201ENST00000612996 587 ntBASIC13.29□□□□□ -0.28
P04436 AC091812.3-201ENST00000621362 345 ntBASIC13.29□□□□□ -0.28
P04436 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
P04436 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.29□□□□□ -0.28
P04436 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
P04436 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.29□□□□□ -0.28
P04436 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.29□□□□□ -0.28
P04436 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
P04436 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04436 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.29□□□□□ -0.28
P04436 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.29□□□□□ -0.28
P04436 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
P04436 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.29□□□□□ -0.28
P04436 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.28□□□□□ -0.28
P04436 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
P04436 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
P04436 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.28□□□□□ -0.28
P04436 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
P04436 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 AC007686.3-201ENST00000619017 3487 ntBASIC13.28□□□□□ -0.28
P04436 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.28□□□□□ -0.28
P04436 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
P04436 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 AC239868.1-201ENST00000369385 493 ntBASIC13.28□□□□□ -0.28
P04436 KRT18P36-201ENST00000411618 1276 ntBASIC13.28□□□□□ -0.28
P04436 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.28□□□□□ -0.28
P04436 ISCA2P1-201ENST00000425548 448 ntBASIC13.28□□□□□ -0.28
P04436 ST13P19-201ENST00000442505 1124 ntBASIC13.28□□□□□ -0.28
P04436 AL353637.1-201ENST00000451571 732 ntBASIC13.28□□□□□ -0.28
P04436 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.28□□□□□ -0.28
P04436 TPT1P11-201ENST00000458482 498 ntBASIC13.28□□□□□ -0.28
P04436 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
P04436 AC021016.3-201ENST00000608367 477 ntBASIC13.28□□□□□ -0.28
P04436 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.28□□□□□ -0.28
P04436 MIR6074-201ENST00000612054 107 ntBASIC13.28□□□□□ -0.28
P04436 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.28□□□□□ -0.28
P04436 AL591471.1-201ENST00000621855 229 ntBASIC13.28□□□□□ -0.28
P04436 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.28□□□□□ -0.28
P04436 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.28□□□□□ -0.28
P04436 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.28□□□□□ -0.28
P04436 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.28□□□□□ -0.28
P04436 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms