Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CD74P04233 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CD74P04233 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.26□□□□□ -0.45
CD74P04233 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CD74P04233 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.26□□□□□ -0.45
CD74P04233 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.26□□□□□ -0.45
CD74P04233 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CD74P04233 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 AC007431.3-201ENST00000623221 587 ntBASIC12.26□□□□□ -0.45
CD74P04233 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.26□□□□□ -0.45
CD74P04233 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD74P04233 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CD74P04233 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
CD74P04233 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.25□□□□□ -0.45
CD74P04233 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
CD74P04233 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.25□□□□□ -0.45
CD74P04233 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
CD74P04233 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
CD74P04233 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
CD74P04233 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CD74P04233 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.25□□□□□ -0.45
CD74P04233 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.25□□□□□ -0.45
CD74P04233 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.25□□□□□ -0.45
CD74P04233 MIR940-201ENST00000401276 94 ntBASIC12.25□□□□□ -0.45
CD74P04233 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.25□□□□□ -0.45
CD74P04233 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.25□□□□□ -0.45
CD74P04233 KLF2P2-201ENST00000416807 1039 ntBASIC12.25□□□□□ -0.45
CD74P04233 ARSEP1-201ENST00000420443 635 ntBASIC12.25□□□□□ -0.45
CD74P04233 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.25□□□□□ -0.45
CD74P04233 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.25□□□□□ -0.45
CD74P04233 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.25□□□□□ -0.45
CD74P04233 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.25□□□□□ -0.45
CD74P04233 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.25□□□□□ -0.45
CD74P04233 ALG3P1-201ENST00000508806 1114 ntBASIC12.25□□□□□ -0.45
CD74P04233 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.25□□□□□ -0.45
CD74P04233 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.25□□□□□ -0.45
CD74P04233 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
CD74P04233 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.25□□□□□ -0.45
CD74P04233 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.25□□□□□ -0.45
CD74P04233 AC027237.1-201ENST00000560942 655 ntBASIC12.25□□□□□ -0.45
CD74P04233 RARRES2P5-201ENST00000564013 466 ntBASIC12.25□□□□□ -0.45
CD74P04233 SPDYE22P-201ENST00000582158 798 ntBASIC12.25□□□□□ -0.45
CD74P04233 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
CD74P04233 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CD74P04233 AC004466.1-201ENST00000599515 1080 ntBASIC12.25□□□□□ -0.45
CD74P04233 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.25□□□□□ -0.45
CD74P04233 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CD74P04233 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.25□□□□□ -0.45
CD74P04233 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms