Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
APOA1P02647 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC13.04□□□□□ -0.32
APOA1P02647 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.04□□□□□ -0.32
APOA1P02647 AGAP10P-201ENST00000454844 2418 ntBASIC13.04□□□□□ -0.32
APOA1P02647 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
APOA1P02647 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
APOA1P02647 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.04□□□□□ -0.32
APOA1P02647 Z98257.2-202ENST00000641138 1548 ntBASIC13.04□□□□□ -0.32
APOA1P02647 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
APOA1P02647 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.04□□□□□ -0.32
APOA1P02647 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.04□□□□□ -0.32
APOA1P02647 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.04□□□□□ -0.32
APOA1P02647 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
APOA1P02647 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.04□□□□□ -0.32
APOA1P02647 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.04□□□□□ -0.32
APOA1P02647 AC007614.5-201ENST00000623424 8892 ntBASIC13.04□□□□□ -0.32
APOA1P02647 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.04□□□□□ -0.32
APOA1P02647 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.04□□□□□ -0.32
APOA1P02647 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
APOA1P02647 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.04□□□□□ -0.32
APOA1P02647 IGHV3-22-201ENST00000520721 359 ntBASIC13.04□□□□□ -0.32
APOA1P02647 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.04□□□□□ -0.32
APOA1P02647 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.04□□□□□ -0.32
APOA1P02647 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
APOA1P02647 AL049840.3-201ENST00000602669 611 ntBASIC13.04□□□□□ -0.32
APOA1P02647 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.04□□□□□ -0.32
APOA1P02647 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC13.04□□□□□ -0.32
APOA1P02647 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.04□□□□□ -0.32
APOA1P02647 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.04□□□□□ -0.32
APOA1P02647 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.04□□□□□ -0.32
APOA1P02647 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOA1P02647 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC13.03□□□□□ -0.32
APOA1P02647 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.03□□□□□ -0.32
APOA1P02647 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
APOA1P02647 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 DNM1P41-201ENST00000623634 3350 ntBASIC13.03□□□□□ -0.32
APOA1P02647 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
APOA1P02647 AC135782.3-201ENST00000562782 2105 ntBASIC13.03□□□□□ -0.32
APOA1P02647 AC134407.3-201ENST00000624035 2139 ntBASIC13.03□□□□□ -0.32
APOA1P02647 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.03□□□□□ -0.32
APOA1P02647 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
APOA1P02647 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.03□□□□□ -0.32
APOA1P02647 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.03□□□□□ -0.32
APOA1P02647 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.03□□□□□ -0.32
APOA1P02647 AC074338.1-201ENST00000416825 156 ntBASIC13.03□□□□□ -0.32
APOA1P02647 AC136604.1-202ENST00000425471 771 ntBASIC13.03□□□□□ -0.32
APOA1P02647 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.03□□□□□ -0.32
APOA1P02647 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
APOA1P02647 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.03□□□□□ -0.32
APOA1P02647 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.03□□□□□ -0.32
APOA1P02647 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
APOA1P02647 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.03□□□□□ -0.32
APOA1P02647 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.03□□□□□ -0.32
APOA1P02647 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.03□□□□□ -0.32
APOA1P02647 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.03□□□□□ -0.32
APOA1P02647 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
APOA1P02647 AL773604.1-201ENST00000617417 272 ntBASIC13.03□□□□□ -0.32
APOA1P02647 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.03□□□□□ -0.32
APOA1P02647 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.03□□□□□ -0.32
APOA1P02647 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms