Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.66■□□□□ 0.1
CSPG5O95196 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG5O95196 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG5O95196 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CSPG5O95196 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG5O95196 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG5O95196 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.66■□□□□ 0.1
CSPG5O95196 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG5O95196 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CSPG5O95196 MIR1227-201ENST00000408484 88 ntBASIC15.66■□□□□ 0.1
CSPG5O95196 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 AC004837.1-201ENST00000446267 564 ntBASIC15.66■□□□□ 0.1
CSPG5O95196 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.66■□□□□ 0.1
CSPG5O95196 RPL18AP3-201ENST00000462885 528 ntBASIC15.66■□□□□ 0.1
CSPG5O95196 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG5O95196 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.66■□□□□ 0.1
CSPG5O95196 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.66■□□□□ 0.1
CSPG5O95196 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.66■□□□□ 0.1
CSPG5O95196 AC087392.5-201ENST00000612517 489 ntBASIC15.66■□□□□ 0.1
CSPG5O95196 AC133540.1-201ENST00000620845 1019 ntBASIC15.66■□□□□ 0.1
CSPG5O95196 AC005618.3-201ENST00000624928 458 ntBASIC15.66■□□□□ 0.1
CSPG5O95196 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG5O95196 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.66■□□□□ 0.1
CSPG5O95196 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG5O95196 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.66■□□□□ 0.1
CSPG5O95196 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CSPG5O95196 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG5O95196 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CSPG5O95196 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CSPG5O95196 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CSPG5O95196 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.65■□□□□ 0.1
CSPG5O95196 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.65■□□□□ 0.1
CSPG5O95196 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CSPG5O95196 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CSPG5O95196 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.65■□□□□ 0.1
CSPG5O95196 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CSPG5O95196 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CSPG5O95196 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.65■□□□□ 0.1
CSPG5O95196 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.65■□□□□ 0.1
CSPG5O95196 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.65■□□□□ 0.1
CSPG5O95196 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.65■□□□□ 0.1
CSPG5O95196 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.65■□□□□ 0.1
CSPG5O95196 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.65■□□□□ 0.1
CSPG5O95196 PHBP15-201ENST00000574228 665 ntBASIC15.65■□□□□ 0.1
CSPG5O95196 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.65■□□□□ 0.1
CSPG5O95196 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.65■□□□□ 0.1
CSPG5O95196 MIR6858-201ENST00000620733 67 ntBASIC15.65■□□□□ 0.1
CSPG5O95196 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.65■□□□□ 0.1
CSPG5O95196 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.65■□□□□ 0.1
CSPG5O95196 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CSPG5O95196 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.65■□□□□ 0.1
CSPG5O95196 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.65■□□□□ 0.1
CSPG5O95196 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CSPG5O95196 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.65■□□□□ 0.1
CSPG5O95196 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CSPG5O95196 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.65■□□□□ 0.1
CSPG5O95196 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.65■□□□□ 0.1
CSPG5O95196 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSPG5O95196 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CSPG5O95196 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms