Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC18.65■□□□□ 0.58
LTN1O94822 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC18.65■□□□□ 0.58
LTN1O94822 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LTN1O94822 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC18.65■□□□□ 0.58
LTN1O94822 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC18.65■□□□□ 0.58
LTN1O94822 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC18.65■□□□□ 0.58
LTN1O94822 GALP-202ENST00000440823 889 ntTSL 5 BASIC18.65■□□□□ 0.58
LTN1O94822 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.65■□□□□ 0.58
LTN1O94822 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.65■□□□□ 0.58
LTN1O94822 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LTN1O94822 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LTN1O94822 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC18.64■□□□□ 0.58
LTN1O94822 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LTN1O94822 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LTN1O94822 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LTN1O94822 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LTN1O94822 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LTN1O94822 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LTN1O94822 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LTN1O94822 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LTN1O94822 AL080243.1-201ENST00000423293 1060 ntBASIC18.64■□□□□ 0.57
LTN1O94822 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC18.64■□□□□ 0.57
LTN1O94822 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC18.64■□□□□ 0.57
LTN1O94822 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC18.64■□□□□ 0.57
LTN1O94822 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LTN1O94822 KNOP1P1-201ENST00000542108 989 ntBASIC18.64■□□□□ 0.57
LTN1O94822 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC18.64■□□□□ 0.57
LTN1O94822 AL591424.3-201ENST00000614278 872 ntBASIC18.64■□□□□ 0.57
LTN1O94822 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LTN1O94822 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LTN1O94822 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC18.64■□□□□ 0.57
LTN1O94822 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC18.64■□□□□ 0.57
LTN1O94822 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LTN1O94822 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LTN1O94822 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.64■□□□□ 0.57
LTN1O94822 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LTN1O94822 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LTN1O94822 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LTN1O94822 DKKL1P1-201ENST00000400550 698 ntBASIC18.63■□□□□ 0.57
LTN1O94822 SERF2-206ENST00000409291 807 ntTSL 3 BASIC18.63■□□□□ 0.57
LTN1O94822 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 NALT1-202ENST00000450304 437 ntTSL 3 BASIC18.63■□□□□ 0.57
LTN1O94822 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC18.63■□□□□ 0.57
LTN1O94822 MBP-238ENST00000580402 915 ntTSL 5 BASIC18.63■□□□□ 0.57
LTN1O94822 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC18.63■□□□□ 0.57
LTN1O94822 URAHP-205ENST00000610227 398 ntBASIC18.63■□□□□ 0.57
LTN1O94822 AC026120.2-201ENST00000617239 309 ntBASIC18.63■□□□□ 0.57
LTN1O94822 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC18.63■□□□□ 0.57
LTN1O94822 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.63■□□□□ 0.57
LTN1O94822 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LTN1O94822 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.63■□□□□ 0.57
LTN1O94822 AC015802.1-201ENST00000588104 1449 ntBASIC18.63■□□□□ 0.57
LTN1O94822 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LTN1O94822 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.63■□□□□ 0.57
LTN1O94822 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC18.63■□□□□ 0.57
LTN1O94822 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LTN1O94822 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LTN1O94822 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC18.63■□□□□ 0.57
LTN1O94822 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LTN1O94822 Z98885.3-201ENST00000624882 1757 ntBASIC18.63■□□□□ 0.57
LTN1O94822 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LTN1O94822 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC18.63■□□□□ 0.57
LTN1O94822 AC079250.1-201ENST00000456046 531 ntBASIC18.63■□□□□ 0.57
LTN1O94822 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC18.63■□□□□ 0.57
LTN1O94822 GDNF-207ENST00000515058 764 ntTSL 5 BASIC18.63■□□□□ 0.57
LTN1O94822 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC18.63■□□□□ 0.57
LTN1O94822 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LTN1O94822 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC18.63■□□□□ 0.57
LTN1O94822 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC18.63■□□□□ 0.57
LTN1O94822 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC18.63■□□□□ 0.57
LTN1O94822 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LTN1O94822 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTN1O94822 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC18.62■□□□□ 0.57
LTN1O94822 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.62■□□□□ 0.57
LTN1O94822 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LTN1O94822 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.62■□□□□ 0.57
LTN1O94822 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LTN1O94822 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms