Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.69□□□□□ -0.06
GPC4O75487 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.69□□□□□ -0.06
GPC4O75487 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.69□□□□□ -0.06
GPC4O75487 CROCCP4-201ENST00000457096 498 ntBASIC14.69□□□□□ -0.06
GPC4O75487 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.69□□□□□ -0.06
GPC4O75487 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.69□□□□□ -0.06
GPC4O75487 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.69□□□□□ -0.06
GPC4O75487 AP000812.2-201ENST00000538934 718 ntBASIC14.69□□□□□ -0.06
GPC4O75487 AC078819.1-201ENST00000547454 765 ntBASIC14.69□□□□□ -0.06
GPC4O75487 AC012085.1-201ENST00000548270 765 ntBASIC14.69□□□□□ -0.06
GPC4O75487 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.69□□□□□ -0.06
GPC4O75487 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.69□□□□□ -0.06
GPC4O75487 ECM1P1-201ENST00000604092 1279 ntBASIC14.69□□□□□ -0.06
GPC4O75487 AC006453.4-201ENST00000636949 1252 ntBASIC14.69□□□□□ -0.06
GPC4O75487 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.69□□□□□ -0.06
GPC4O75487 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.69□□□□□ -0.06
GPC4O75487 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
GPC4O75487 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
GPC4O75487 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.69□□□□□ -0.06
GPC4O75487 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.68□□□□□ -0.06
GPC4O75487 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
GPC4O75487 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.68□□□□□ -0.06
GPC4O75487 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.68□□□□□ -0.06
GPC4O75487 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.68□□□□□ -0.06
GPC4O75487 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.68□□□□□ -0.06
GPC4O75487 BOLA2P3-201ENST00000404566 256 ntBASIC14.68□□□□□ -0.06
GPC4O75487 AC112492.5-201ENST00000421897 457 ntBASIC14.68□□□□□ -0.06
GPC4O75487 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.68□□□□□ -0.06
GPC4O75487 AL590640.2-201ENST00000457038 527 ntBASIC14.68□□□□□ -0.06
GPC4O75487 AC022447.6-201ENST00000515522 438 ntBASIC14.68□□□□□ -0.06
GPC4O75487 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GPC4O75487 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.68□□□□□ -0.06
GPC4O75487 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.68□□□□□ -0.06
GPC4O75487 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
GPC4O75487 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.68□□□□□ -0.06
GPC4O75487 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
GPC4O75487 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.68□□□□□ -0.06
GPC4O75487 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
GPC4O75487 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.68□□□□□ -0.06
GPC4O75487 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.68□□□□□ -0.06
GPC4O75487 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.68□□□□□ -0.06
GPC4O75487 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.68□□□□□ -0.06
GPC4O75487 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GPC4O75487 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
GPC4O75487 FKBP4P6-201ENST00000457486 1332 ntBASIC14.67□□□□□ -0.06
GPC4O75487 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC14.67□□□□□ -0.06
GPC4O75487 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 AP000593.2-201ENST00000542775 1433 ntBASIC14.67□□□□□ -0.06
GPC4O75487 AC079781.5-202ENST00000641784 3743 ntBASIC14.67□□□□□ -0.06
GPC4O75487 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
GPC4O75487 PDIA3P1-201ENST00000471856 1510 ntBASIC14.67□□□□□ -0.06
GPC4O75487 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
GPC4O75487 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
GPC4O75487 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
GPC4O75487 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
GPC4O75487 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.67□□□□□ -0.06
GPC4O75487 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
GPC4O75487 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GPC4O75487 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms