Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RIPK2O43353 SOCS2P1-201ENST00000417727 557 ntBASIC14.8□□□□□ -0.04
RIPK2O43353 MEP1AP4-201ENST00000423244 1087 ntBASIC14.8□□□□□ -0.04
RIPK2O43353 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.8□□□□□ -0.04
RIPK2O43353 AP000347.1-202ENST00000435868 847 ntBASIC14.8□□□□□ -0.04
RIPK2O43353 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.8□□□□□ -0.04
RIPK2O43353 PUDPP3-201ENST00000445368 636 ntBASIC14.8□□□□□ -0.04
RIPK2O43353 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.8□□□□□ -0.04
RIPK2O43353 AC004967.1-201ENST00000453589 447 ntBASIC14.8□□□□□ -0.04
RIPK2O43353 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.8□□□□□ -0.04
RIPK2O43353 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.8□□□□□ -0.04
RIPK2O43353 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.8□□□□□ -0.04
RIPK2O43353 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.8□□□□□ -0.04
RIPK2O43353 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.8□□□□□ -0.04
RIPK2O43353 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.8□□□□□ -0.04
RIPK2O43353 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.8□□□□□ -0.04
RIPK2O43353 AC008761.3-201ENST00000624803 892 ntBASIC14.8□□□□□ -0.04
RIPK2O43353 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 KRT8P28-201ENST00000433288 1390 ntBASIC14.8□□□□□ -0.04
RIPK2O43353 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RIPK2O43353 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.8□□□□□ -0.04
RIPK2O43353 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.8□□□□□ -0.04
RIPK2O43353 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.8□□□□□ -0.04
RIPK2O43353 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.8□□□□□ -0.04
RIPK2O43353 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RIPK2O43353 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.79□□□□□ -0.04
RIPK2O43353 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RIPK2O43353 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 SPDYE19P-201ENST00000338590 713 ntBASIC14.79□□□□□ -0.04
RIPK2O43353 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.79□□□□□ -0.04
RIPK2O43353 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.79□□□□□ -0.04
RIPK2O43353 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RIPK2O43353 AC136604.1-202ENST00000425471 771 ntBASIC14.79□□□□□ -0.04
RIPK2O43353 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.79□□□□□ -0.04
RIPK2O43353 AC005014.1-201ENST00000432006 2976 ntBASIC14.79□□□□□ -0.04
RIPK2O43353 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.79□□□□□ -0.04
RIPK2O43353 MKRN5P-201ENST00000445263 1467 ntBASIC14.79□□□□□ -0.04
RIPK2O43353 FAM86GP-201ENST00000448322 971 ntBASIC14.79□□□□□ -0.04
RIPK2O43353 MYCLP2-201ENST00000449268 967 ntBASIC14.79□□□□□ -0.04
RIPK2O43353 DNAJB3-202ENST00000449667 1266 ntBASIC14.79□□□□□ -0.04
RIPK2O43353 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
RIPK2O43353 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.79□□□□□ -0.04
RIPK2O43353 AC009474.1-201ENST00000455096 1565 ntBASIC14.79□□□□□ -0.04
RIPK2O43353 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.79□□□□□ -0.04
RIPK2O43353 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.79□□□□□ -0.04
RIPK2O43353 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.79□□□□□ -0.04
RIPK2O43353 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.79□□□□□ -0.04
RIPK2O43353 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.79□□□□□ -0.04
RIPK2O43353 AC005586.2-201ENST00000563946 837 ntBASIC14.79□□□□□ -0.04
RIPK2O43353 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.79□□□□□ -0.04
RIPK2O43353 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.79□□□□□ -0.04
RIPK2O43353 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 AL445209.1-201ENST00000607269 3491 ntBASIC14.79□□□□□ -0.04
RIPK2O43353 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RIPK2O43353 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.79□□□□□ -0.04
RIPK2O43353 AC005252.2-201ENST00000624630 1141 ntBASIC14.79□□□□□ -0.04
RIPK2O43353 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.79□□□□□ -0.04
RIPK2O43353 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.79□□□□□ -0.04
RIPK2O43353 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
RIPK2O43353 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RIPK2O43353 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.79□□□□□ -0.04
RIPK2O43353 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RIPK2O43353 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
RIPK2O43353 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.79□□□□□ -0.04
RIPK2O43353 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.79□□□□□ -0.04
RIPK2O43353 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RIPK2O43353 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.78□□□□□ -0.04
RIPK2O43353 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.78□□□□□ -0.04
RIPK2O43353 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.78□□□□□ -0.04
RIPK2O43353 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms