Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 AC005229.1-201ENST00000392885 409 ntBASIC11.71□□□□□ -0.53
UPK2O00526 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
UPK2O00526 PTPA-215ENST00000432124 567 ntTSL 4 BASIC11.71□□□□□ -0.53
UPK2O00526 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.71□□□□□ -0.53
UPK2O00526 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.71□□□□□ -0.53
UPK2O00526 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
UPK2O00526 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.71□□□□□ -0.53
UPK2O00526 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.71□□□□□ -0.53
UPK2O00526 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
UPK2O00526 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.71□□□□□ -0.54
UPK2O00526 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
UPK2O00526 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
UPK2O00526 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
UPK2O00526 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.71□□□□□ -0.54
UPK2O00526 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
UPK2O00526 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
UPK2O00526 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
UPK2O00526 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.71□□□□□ -0.54
UPK2O00526 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
UPK2O00526 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 PTENP1-202ENST00000532280 3996 ntBASIC11.7□□□□□ -0.54
UPK2O00526 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
UPK2O00526 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK2O00526 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK2O00526 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK2O00526 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
UPK2O00526 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 AL157996.1-201ENST00000624684 2299 ntBASIC11.7□□□□□ -0.54
UPK2O00526 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.7□□□□□ -0.54
UPK2O00526 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
UPK2O00526 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
UPK2O00526 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
UPK2O00526 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 ZBTB12BP-201ENST00000314232 1122 ntBASIC11.7□□□□□ -0.54
UPK2O00526 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 AC098614.1-201ENST00000368528 745 ntBASIC11.7□□□□□ -0.54
UPK2O00526 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
UPK2O00526 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.7□□□□□ -0.54
UPK2O00526 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 CRB3P1-201ENST00000449338 276 ntBASIC11.7□□□□□ -0.54
UPK2O00526 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC11.7□□□□□ -0.54
UPK2O00526 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
UPK2O00526 AP003171.2-201ENST00000528208 925 ntBASIC11.7□□□□□ -0.54
UPK2O00526 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.7□□□□□ -0.54
UPK2O00526 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.7□□□□□ -0.54
UPK2O00526 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.7□□□□□ -0.54
UPK2O00526 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.7□□□□□ -0.54
UPK2O00526 AC008825.2-201ENST00000603374 718 ntBASIC11.7□□□□□ -0.54
UPK2O00526 AC104506.1-201ENST00000609247 429 ntBASIC11.7□□□□□ -0.54
UPK2O00526 AC027601.3-201ENST00000622907 509 ntBASIC11.7□□□□□ -0.54
UPK2O00526 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.7□□□□□ -0.54
UPK2O00526 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK2O00526 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
UPK2O00526 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK2O00526 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK2O00526 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
UPK2O00526 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
UPK2O00526 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
UPK2O00526 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.7□□□□□ -0.54
UPK2O00526 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UPK2O00526 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.69□□□□□ -0.54
UPK2O00526 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
UPK2O00526 AC111170.3-201ENST00000624282 2464 ntBASIC11.69□□□□□ -0.54
UPK2O00526 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
UPK2O00526 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.69□□□□□ -0.54
UPK2O00526 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms