Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 RHPN1-AS1-201ENST00000518049 1918 ntBASIC10.34□□□□□ -0.75
TMEM238C9JI98 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM238C9JI98 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM238C9JI98 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM238C9JI98 AP002414.3-201ENST00000589352 1468 ntBASIC10.34□□□□□ -0.75
TMEM238C9JI98 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 MED24-201ENST00000356271 3446 ntTSL 2 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM238C9JI98 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM238C9JI98 AC027369.3-201ENST00000530465 3707 ntBASIC10.34□□□□□ -0.75
TMEM238C9JI98 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM238C9JI98 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM238C9JI98 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM238C9JI98 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM238C9JI98 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM238C9JI98 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM238C9JI98 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM238C9JI98 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
TMEM238C9JI98 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
TMEM238C9JI98 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 ARMCX2-203ENST00000356824 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 CETP-203ENST00000566128 1733 ntTSL 5 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 AC009078.3-201ENST00000624205 4084 ntBASIC10.33□□□□□ -0.76
TMEM238C9JI98 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 MRPL20P1-201ENST00000400819 433 ntBASIC10.33□□□□□ -0.76
TMEM238C9JI98 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 IGHV3-65-201ENST00000523210 341 ntBASIC10.33□□□□□ -0.76
TMEM238C9JI98 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 AC008735.5-201ENST00000623544 497 ntBASIC10.33□□□□□ -0.76
TMEM238C9JI98 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 ADGRE2-209ENST00000596991 2596 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 PMS2-201ENST00000265849 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 GRPEL2-201ENST00000329271 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 HK2P1-201ENST00000447818 2737 ntBASIC10.33□□□□□ -0.76
TMEM238C9JI98 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 FP325332.1-201ENST00000624818 2045 ntBASIC10.33□□□□□ -0.76
TMEM238C9JI98 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC10.33□□□□□ -0.76
TMEM238C9JI98 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM238C9JI98 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms