Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC060814.4-201ENST00000594169 2163 ntBASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 AC005237.2-201ENST00000434368 219 ntBASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 AK2P2-201ENST00000439142 405 ntBASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 DRD5P1-201ENST00000456605 1438 ntBASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
HMGB1P1B2RPK0 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 AC004870.1-201ENST00000315132 882 ntBASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 AL139094.1-201ENST00000405549 1188 ntBASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 FAM58DP-201ENST00000428076 619 ntBASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 AP001002.3-201ENST00000623482 206 ntBASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 AL603764.1-201ENST00000636452 321 ntBASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGB1P1B2RPK0 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGB1P1B2RPK0 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms