Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 MARK2P9-201ENST00000430958 1727 ntBASIC15.49■□□□□ 0.07
RCCD1A6NED2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 AL162726.2-201ENST00000438986 1017 ntBASIC15.48■□□□□ 0.07
RCCD1A6NED2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 AC005586.2-201ENST00000563946 837 ntBASIC15.48■□□□□ 0.07
RCCD1A6NED2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 MIR4683-201ENST00000579659 81 ntBASIC15.48■□□□□ 0.07
RCCD1A6NED2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms