Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 AC005586.2-201ENST00000563946 837 ntBASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 MIR4525-201ENST00000580000 75 ntBASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGC4Q9Y5F7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 AC106794.1-201ENST00000506935 792 ntBASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 AC133540.1-201ENST00000620845 1019 ntBASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGC4Q9Y5F7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 MIR1247-201ENST00000408206 136 ntBASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 AL161932.2-201ENST00000435436 679 ntBASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 AC099548.2-209ENST00000480264 625 ntBASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 SNORD3B-2-202ENST00000571722 791 ntBASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 RN7SL602P-201ENST00000578326 324 ntBASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms