Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 RN7SKP230-201ENST00000365642 335 ntBASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 ACTBP8-201ENST00000403258 1108 ntBASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 FAM86GP-201ENST00000448322 971 ntBASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AC023310.3-201ENST00000557027 670 ntBASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AC100756.1-201ENST00000562736 682 ntBASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AC104794.3-201ENST00000566840 1248 ntBASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AC138749.3-201ENST00000567691 622 ntBASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AC008738.7-201ENST00000609744 511 ntBASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AC116165.1-201ENST00000611806 668 ntBASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AC134684.3-201ENST00000641758 218 ntBASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 NCLP1-201ENST00000445357 1963 ntBASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms