Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 TLE1P1-201ENST00000422965 589 ntBASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 AC004832.2-201ENST00000426397 482 ntBASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 AC007969.1-201ENST00000433675 447 ntBASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 AL353779.1-201ENST00000434793 351 ntBASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 AL109936.8-201ENST00000641772 604 ntBASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 POM121L4P-202ENST00000427789 1891 ntBASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 AC015688.4-201ENST00000580780 1647 ntBASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 AL138799.1-201ENST00000448213 1675 ntBASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 GPS2P2-201ENST00000430745 888 ntBASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 AC051619.7-201ENST00000568314 623 ntBASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 AL513210.1-201ENST00000629608 234 ntBASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KCNIP3Q9Y2W7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 AC114271.1-201ENST00000612689 2813 ntBASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms