Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 MRPL37P1-201ENST00000592451 1337 ntBASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 AC007969.1-201ENST00000433675 447 ntBASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 RN7SL618P-201ENST00000477850 296 ntBASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 AC040169.1-201ENST00000565382 521 ntBASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 DUX4L47-201ENST00000566374 394 ntBASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 AC051619.7-201ENST00000568314 623 ntBASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 AL513210.1-201ENST00000629608 234 ntBASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 KHSRPP1-201ENST00000427983 1768 ntBASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.97□□□□□ -0.49
RCL1Q9Y2P8 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RCL1Q9Y2P8 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms