Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 OR7E115P-201ENST00000382617 1024 ntBASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 AC092896.1-201ENST00000465850 380 ntBASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 AC145285.5-201ENST00000562217 361 ntBASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 AL359258.3-201ENST00000622910 2331 ntBASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 AC027612.2-202ENST00000445955 1199 ntBASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 KRT18P62-201ENST00000446618 1287 ntBASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 AC113347.2-201ENST00000512350 279 ntBASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 AC080013.5-201ENST00000607044 679 ntBASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 AL591122.2-201ENST00000624125 1853 ntBASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
ZC3H4Q9UPT8 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 SNORA57-201ENST00000383870 149 ntBASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 SOD2-205ENST00000444946 917 ntTSL 2 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 SEPHS2P1-201ENST00000511618 1162 ntBASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 AC095040.1-201ENST00000513286 675 ntBASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 AC090510.3-201ENST00000615831 821 ntBASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms