Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 AHCYP4-201ENST00000419201 1315 ntBASIC13.39□□□□□ -0.27
LRFN1Q9P244 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.38□□□□□ -0.27
LRFN1Q9P244 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.38□□□□□ -0.27
LRFN1Q9P244 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 MIR3907-201ENST00000579424 151 ntBASIC13.38□□□□□ -0.27
LRFN1Q9P244 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 AC016629.1-201ENST00000596579 586 ntBASIC13.38□□□□□ -0.27
LRFN1Q9P244 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 AL353770.1-201ENST00000614915 403 ntBASIC13.38□□□□□ -0.27
LRFN1Q9P244 AC079336.7-201ENST00000623428 1078 ntBASIC13.38□□□□□ -0.27
LRFN1Q9P244 AC092299.1-201ENST00000632679 757 ntBASIC13.38□□□□□ -0.27
LRFN1Q9P244 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 AC018629.1-201ENST00000623381 1736 ntBASIC13.38□□□□□ -0.27
LRFN1Q9P244 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 FAM45BP-202ENST00000592932 1624 ntBASIC13.38□□□□□ -0.27
LRFN1Q9P244 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 TNRC18P2-201ENST00000417666 2714 ntBASIC13.38□□□□□ -0.27
LRFN1Q9P244 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRFN1Q9P244 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.38□□□□□ -0.27
LRFN1Q9P244 KHSRPP1-201ENST00000427983 1768 ntBASIC13.37□□□□□ -0.27
LRFN1Q9P244 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.37□□□□□ -0.27
LRFN1Q9P244 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LRFN1Q9P244 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
LRFN1Q9P244 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.37□□□□□ -0.27
LRFN1Q9P244 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRFN1Q9P244 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms