Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 RN7SL288P-201ENST00000490496 291 ntBASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 AC023968.2-201ENST00000560593 1049 ntBASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 AC005274.1-201ENST00000623460 802 ntBASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A1Q9NWF4 CROCCP1-201ENST00000426910 5675 ntBASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 ACTBP14-201ENST00000411655 1089 ntBASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 AC092570.1-201ENST00000414446 469 ntBASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 AL080243.1-201ENST00000423293 1060 ntBASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 COQ10BP2-201ENST00000513804 724 ntBASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 TYMSP2-201ENST00000589501 424 ntBASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 AL049840.2-201ENST00000602722 535 ntBASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 MME-218ENST00000625667 363 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC52A1Q9NWF4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
SLC52A1Q9NWF4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC52A1Q9NWF4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC52A1Q9NWF4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.33■□□□□ 0.84
SLC52A1Q9NWF4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC52A1Q9NWF4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SLC52A1Q9NWF4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.84
SLC52A1Q9NWF4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC52A1Q9NWF4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SLC52A1Q9NWF4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SLC52A1Q9NWF4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SLC52A1Q9NWF4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 PAUPAR-201ENST00000630360 2965 ntBASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 BCRP4-201ENST00000506079 804 ntBASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 MIR5001-201ENST00000580185 100 ntBASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC52A1Q9NWF4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms