Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 AC215219.1-201ENST00000400706 1817 ntBASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 ACTG1P3-201ENST00000431775 1114 ntBASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 RN7SL837P-201ENST00000463010 287 ntBASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 KRT18P25-201ENST00000508931 1278 ntBASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 PTP4A1P2-201ENST00000546033 454 ntBASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 AP005019.2-201ENST00000615104 511 ntBASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 AC005252.2-201ENST00000624630 1141 ntBASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 AC089987.1-201ENST00000551654 2209 ntBASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 TTTY23B-201ENST00000442790 549 ntBASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 AC114812.1-204ENST00000449669 728 ntBASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 GAPDHP21-201ENST00000450301 1010 ntBASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms