Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
MMP25Q9NPA2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
MMP25Q9NPA2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
MMP25Q9NPA2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
MMP25Q9NPA2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.52□□□□□ -0.24
MMP25Q9NPA2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
MMP25Q9NPA2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
MMP25Q9NPA2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
MMP25Q9NPA2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
MMP25Q9NPA2 AC239868.1-201ENST00000369385 493 ntBASIC13.52□□□□□ -0.25
MMP25Q9NPA2 KRT18P36-201ENST00000411618 1276 ntBASIC13.52□□□□□ -0.25
MMP25Q9NPA2 UPF3AP2-201ENST00000457924 1132 ntBASIC13.52□□□□□ -0.25
MMP25Q9NPA2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 CHMP4BP1-201ENST00000556017 588 ntBASIC13.52□□□□□ -0.25
MMP25Q9NPA2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 AL157813.1-201ENST00000612996 587 ntBASIC13.52□□□□□ -0.25
MMP25Q9NPA2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 KRT8P21-201ENST00000430398 1491 ntBASIC13.52□□□□□ -0.25
MMP25Q9NPA2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
MMP25Q9NPA2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 AC018629.1-201ENST00000623381 1736 ntBASIC13.51□□□□□ -0.25
MMP25Q9NPA2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 ISCA2P1-201ENST00000425548 448 ntBASIC13.51□□□□□ -0.25
MMP25Q9NPA2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 AL353637.1-201ENST00000451571 732 ntBASIC13.51□□□□□ -0.25
MMP25Q9NPA2 AC012618.1-201ENST00000461223 412 ntBASIC13.51□□□□□ -0.25
MMP25Q9NPA2 RN7SL769P-201ENST00000469386 295 ntBASIC13.51□□□□□ -0.25
MMP25Q9NPA2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 RN7SL720P-201ENST00000488178 304 ntBASIC13.51□□□□□ -0.25
MMP25Q9NPA2 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.51□□□□□ -0.25
MMP25Q9NPA2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 AC003686.1-201ENST00000550956 1034 ntBASIC13.51□□□□□ -0.25
MMP25Q9NPA2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 AC097724.1-201ENST00000609581 426 ntBASIC13.51□□□□□ -0.25
MMP25Q9NPA2 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.51□□□□□ -0.25
MMP25Q9NPA2 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MMP25Q9NPA2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms