Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 AC016700.1-201ENST00000429424 312 ntBASIC15.01□□□□□ -0.01
RPRD1AQ96P16 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 AC011742.3-201ENST00000439053 820 ntBASIC15.01□□□□□ -0.01
RPRD1AQ96P16 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 BX284668.4-201ENST00000453917 508 ntBASIC15.01□□□□□ -0.01
RPRD1AQ96P16 MARK2P5-201ENST00000507649 634 ntBASIC15.01□□□□□ -0.01
RPRD1AQ96P16 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 AC005586.2-201ENST00000563946 837 ntBASIC15.01□□□□□ -0.01
RPRD1AQ96P16 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RPRD1AQ96P16 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RPRD1AQ96P16 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15□□□□□ -0.01
RPRD1AQ96P16 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15□□□□□ -0.01
RPRD1AQ96P16 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15□□□□□ -0.01
RPRD1AQ96P16 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15□□□□□ -0.01
RPRD1AQ96P16 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15□□□□□ -0.01
RPRD1AQ96P16 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15□□□□□ -0.01
RPRD1AQ96P16 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RPRD1AQ96P16 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15□□□□□ -0.01
RPRD1AQ96P16 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15□□□□□ -0.01
RPRD1AQ96P16 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15□□□□□ -0.01
RPRD1AQ96P16 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15□□□□□ -0.01
RPRD1AQ96P16 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15□□□□□ -0.01
RPRD1AQ96P16 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15□□□□□ -0.01
RPRD1AQ96P16 AC022217.1-201ENST00000521069 738 ntBASIC15□□□□□ -0.01
RPRD1AQ96P16 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15□□□□□ -0.01
RPRD1AQ96P16 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15□□□□□ -0.01
RPRD1AQ96P16 AC009779.1-201ENST00000551138 283 ntBASIC15□□□□□ -0.01
RPRD1AQ96P16 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15□□□□□ -0.01
RPRD1AQ96P16 AL132994.2-201ENST00000603120 687 ntBASIC15□□□□□ -0.01
RPRD1AQ96P16 AC026740.1-201ENST00000607068 791 ntBASIC15□□□□□ -0.01
RPRD1AQ96P16 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15□□□□□ -0.01
RPRD1AQ96P16 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15□□□□□ -0.01
RPRD1AQ96P16 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 AC011498.7-201ENST00000624986 2027 ntBASIC15□□□□□ -0.01
RPRD1AQ96P16 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15□□□□□ -0.01
RPRD1AQ96P16 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms