Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 FAM21EP-201ENST00000417804 985 ntBASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 IFNWP2-201ENST00000431203 580 ntBASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 CDCA4P4-201ENST00000435216 680 ntBASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 GOLGA6L16P-201ENST00000441780 1299 ntBASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 RPS18P9-201ENST00000482817 460 ntBASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 AC005586.2-201ENST00000563946 837 ntBASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 AC084018.2-201ENST00000613093 2607 ntBASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.52■□□□□ 0.07
TRIM43Q96BQ3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 CCT8L1P-201ENST00000465400 1674 ntBASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 LINC00115-201ENST00000473798 1317 ntBASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 KRT18P62-201ENST00000446618 1287 ntBASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 RN7SL556P-201ENST00000582856 298 ntBASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 AL136982.5-201ENST00000605222 294 ntBASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 AC073869.4-201ENST00000620841 800 ntBASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 AC110057.1-201ENST00000636031 898 ntBASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM43Q96BQ3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM43Q96BQ3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRIM43Q96BQ3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM43Q96BQ3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM43Q96BQ3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM43Q96BQ3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRIM43Q96BQ3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM43Q96BQ3 AC008536.3-201ENST00000623282 1599 ntBASIC15.5■□□□□ 0.07
TRIM43Q96BQ3 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms