Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HPS1Q92902 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.54□□□□□ -0.24
HPS1Q92902 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.54□□□□□ -0.24
HPS1Q92902 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.53□□□□□ -0.24
HPS1Q92902 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.53□□□□□ -0.24
HPS1Q92902 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HPS1Q92902 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.53□□□□□ -0.24
HPS1Q92902 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.53□□□□□ -0.24
HPS1Q92902 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.53□□□□□ -0.24
HPS1Q92902 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HPS1Q92902 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HPS1Q92902 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HPS1Q92902 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 AC098614.1-201ENST00000368528 745 ntBASIC13.53□□□□□ -0.24
HPS1Q92902 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HPS1Q92902 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.53□□□□□ -0.24
HPS1Q92902 FO393414.2-201ENST00000405153 598 ntBASIC13.53□□□□□ -0.24
HPS1Q92902 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.53□□□□□ -0.24
HPS1Q92902 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.53□□□□□ -0.24
HPS1Q92902 KRT17P7-201ENST00000451704 1104 ntBASIC13.53□□□□□ -0.24
HPS1Q92902 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.53□□□□□ -0.24
HPS1Q92902 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
HPS1Q92902 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.53□□□□□ -0.24
HPS1Q92902 AC135586.1-201ENST00000539323 574 ntBASIC13.53□□□□□ -0.24
HPS1Q92902 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.53□□□□□ -0.24
HPS1Q92902 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 AC140912.1-201ENST00000577171 1054 ntBASIC13.53□□□□□ -0.24
HPS1Q92902 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.53□□□□□ -0.24
HPS1Q92902 AC008738.7-201ENST00000609744 511 ntBASIC13.53□□□□□ -0.24
HPS1Q92902 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.53□□□□□ -0.24
HPS1Q92902 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 KRT8P12-202ENST00000472924 1397 ntBASIC13.53□□□□□ -0.24
HPS1Q92902 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HPS1Q92902 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 KRT8P37-201ENST00000451609 1420 ntBASIC13.53□□□□□ -0.24
HPS1Q92902 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.53□□□□□ -0.24
HPS1Q92902 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.53□□□□□ -0.24
HPS1Q92902 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.53□□□□□ -0.24
HPS1Q92902 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.53□□□□□ -0.24
HPS1Q92902 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.53□□□□□ -0.24
HPS1Q92902 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HPS1Q92902 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HPS1Q92902 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
HPS1Q92902 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
HPS1Q92902 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
HPS1Q92902 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HPS1Q92902 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.52□□□□□ -0.24
HPS1Q92902 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HPS1Q92902 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.52□□□□□ -0.24
HPS1Q92902 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
HPS1Q92902 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HPS1Q92902 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.52□□□□□ -0.24
HPS1Q92902 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
HPS1Q92902 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
HPS1Q92902 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
HPS1Q92902 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HPS1Q92902 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HPS1Q92902 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HPS1Q92902 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.52□□□□□ -0.25
HPS1Q92902 AC004945.1-201ENST00000416738 983 ntBASIC13.52□□□□□ -0.25
HPS1Q92902 COX5BP8-201ENST00000416911 349 ntBASIC13.52□□□□□ -0.25
HPS1Q92902 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.52□□□□□ -0.25
HPS1Q92902 SDR42E1P3-201ENST00000438345 502 ntBASIC13.52□□□□□ -0.25
HPS1Q92902 AC093004.1-201ENST00000508850 424 ntBASIC13.52□□□□□ -0.25
HPS1Q92902 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.52□□□□□ -0.25
HPS1Q92902 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.52□□□□□ -0.25
HPS1Q92902 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HPS1Q92902 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.52□□□□□ -0.25
HPS1Q92902 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.52□□□□□ -0.25
HPS1Q92902 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.52□□□□□ -0.25
HPS1Q92902 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HPS1Q92902 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.52□□□□□ -0.25
HPS1Q92902 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms