Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 AC010503.4-201ENST00000615487 688 ntBASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 RN7SL202P-201ENST00000584410 262 ntBASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL22A1Q8NFW1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.58■□□□□ 0.57
COL22A1Q8NFW1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL22A1Q8NFW1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL22A1Q8NFW1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL22A1Q8NFW1 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL22A1Q8NFW1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL22A1Q8NFW1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.58■□□□□ 0.57
COL22A1Q8NFW1 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL22A1Q8NFW1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL22A1Q8NFW1 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL22A1Q8NFW1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
COL22A1Q8NFW1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL22A1Q8NFW1 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 AC026884.1-201ENST00000418296 457 ntBASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 IQCF4-203ENST00000428561 420 ntBASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 RPL29P2-202ENST00000498671 657 ntBASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.58■□□□□ 0.56
COL22A1Q8NFW1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 SIGLEC20P-201ENST00000595243 1311 ntBASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 USP17L6P-201ENST00000382470 1197 ntBASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 AC004910.1-201ENST00000433493 787 ntBASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 AC022447.6-201ENST00000515522 438 ntBASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 AL137028.2-201ENST00000614601 256 ntBASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COL22A1Q8NFW1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms