Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 AC010327.5-201ENST00000586923 3061 ntBASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 TPM3P8-201ENST00000330554 643 ntBASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 TTTY23B-201ENST00000442790 549 ntBASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 AC103988.2-201ENST00000561804 725 ntBASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 AC132938.2-201ENST00000579188 680 ntBASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 MIR3197-201ENST00000582241 73 ntBASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 ECM1P1-201ENST00000604092 1279 ntBASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 IGHV3-72-202ENST00000621503 303 ntBASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 AL358472.5-202ENST00000641448 1267 ntBASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 AL591163.1-201ENST00000641757 987 ntBASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 AC090505.1-201ENST00000430515 1834 ntBASIC12.14□□□□□ -0.47
ZNF439Q8NDP4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 CU639417.3-201ENST00000624240 1404 ntBASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 BCRP2-202ENST00000447763 634 ntBASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 AL590640.2-201ENST00000457038 527 ntBASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF439Q8NDP4 BCRP6-201ENST00000510112 632 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms