Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 AC073150.1-201ENST00000450406 1084 ntBASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 AC093752.3-201ENST00000567343 901 ntBASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 AC097724.1-201ENST00000609581 426 ntBASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 AC023908.3-201ENST00000564211 3047 ntBASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 RNA5SP359-201ENST00000364838 113 ntBASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 AC006335.1-201ENST00000445200 547 ntBASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 AC012618.1-201ENST00000461223 412 ntBASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 MIR4754-201ENST00000582477 89 ntBASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 AL021578.1-201ENST00000613646 709 ntBASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 CCT8L1P-201ENST00000465400 1674 ntBASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms