Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AL590440.2-201ENST00000641973 1595 ntBASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AL354989.2-201ENST00000435838 1540 ntBASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AL512384.1-201ENST00000406683 331 ntBASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AP005018.1-201ENST00000525475 301 ntBASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AC233724.13-201ENST00000598383 410 ntBASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AL022328.1-201ENST00000610050 478 ntBASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AC002472.3-201ENST00000640124 621 ntBASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AL359881.3-201ENST00000602640 1721 ntBASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 AC004945.1-201ENST00000416738 983 ntBASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 AC078819.1-201ENST00000547454 765 ntBASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 AC012085.1-201ENST00000548270 765 ntBASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms