Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 RN7SL351P-201ENST00000469306 248 ntBASIC13.86□□□□□ -0.19
RIF1Q5UIP0 CCNL2P1-201ENST00000512846 969 ntBASIC13.86□□□□□ -0.19
RIF1Q5UIP0 MIR4459-201ENST00000581837 66 ntBASIC13.86□□□□□ -0.19
RIF1Q5UIP0 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 AL031768.1-201ENST00000606542 701 ntBASIC13.86□□□□□ -0.19
RIF1Q5UIP0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 KRT18P33-201ENST00000398525 1043 ntBASIC13.85□□□□□ -0.19
RIF1Q5UIP0 U3.41-201ENST00000408711 219 ntBASIC13.85□□□□□ -0.19
RIF1Q5UIP0 CCND3P1-201ENST00000438347 580 ntBASIC13.85□□□□□ -0.19
RIF1Q5UIP0 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.85□□□□□ -0.19
RIF1Q5UIP0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 AC090616.6-203ENST00000579186 1945 ntBASIC13.85□□□□□ -0.19
RIF1Q5UIP0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 BX679664.3-201ENST00000414070 555 ntBASIC13.85□□□□□ -0.19
RIF1Q5UIP0 AC073210.1-201ENST00000414799 232 ntBASIC13.85□□□□□ -0.19
RIF1Q5UIP0 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 AC113935.1-201ENST00000471722 555 ntBASIC13.85□□□□□ -0.19
RIF1Q5UIP0 MARK2P17-201ENST00000498560 841 ntBASIC13.85□□□□□ -0.19
RIF1Q5UIP0 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 VENTXP3-201ENST00000546480 773 ntBASIC13.85□□□□□ -0.19
RIF1Q5UIP0 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.85□□□□□ -0.19
RIF1Q5UIP0 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 AP000533.1-201ENST00000456143 1177 ntBASIC13.84□□□□□ -0.19
RIF1Q5UIP0 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 COG6-212ENST00000630730 186 ntTSL 5 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 AC103702.1-201ENST00000548801 2630 ntBASIC13.84□□□□□ -0.19
RIF1Q5UIP0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 MTHFR-217ENST00000641820 1569 ntBASIC13.84□□□□□ -0.19
RIF1Q5UIP0 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms