Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.74■□□□□ 0.43
DDR1Q08345 AC104506.1-201ENST00000609247 429 ntBASIC17.74■□□□□ 0.43
DDR1Q08345 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC17.74■□□□□ 0.43
DDR1Q08345 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.74■□□□□ 0.43
DDR1Q08345 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DDR1Q08345 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
DDR1Q08345 FKBP4P8-201ENST00000610931 1369 ntBASIC17.74■□□□□ 0.43
DDR1Q08345 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDR1Q08345 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
DDR1Q08345 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDR1Q08345 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
DDR1Q08345 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
DDR1Q08345 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
DDR1Q08345 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
DDR1Q08345 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DDR1Q08345 AC018442.1-201ENST00000421439 2061 ntBASIC17.73■□□□□ 0.43
DDR1Q08345 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
DDR1Q08345 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
DDR1Q08345 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.73■□□□□ 0.43
DDR1Q08345 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
DDR1Q08345 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
DDR1Q08345 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.73■□□□□ 0.43
DDR1Q08345 AL080243.1-201ENST00000423293 1060 ntBASIC17.73■□□□□ 0.43
DDR1Q08345 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC17.73■□□□□ 0.43
DDR1Q08345 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.73■□□□□ 0.43
DDR1Q08345 AC087203.1-201ENST00000532111 1181 ntBASIC17.73■□□□□ 0.43
DDR1Q08345 KNOP1P1-201ENST00000542108 989 ntBASIC17.73■□□□□ 0.43
DDR1Q08345 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC17.73■□□□□ 0.43
DDR1Q08345 BATF-202ENST00000555504 361 ntTSL 2 BASIC17.73■□□□□ 0.43
DDR1Q08345 EMC4-208ENST00000559078 599 ntTSL 3 BASIC17.73■□□□□ 0.43
DDR1Q08345 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.73■□□□□ 0.43
DDR1Q08345 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.73■□□□□ 0.43
DDR1Q08345 CES1P2-201ENST00000566467 1242 ntBASIC17.73■□□□□ 0.43
DDR1Q08345 RN7SL121P-201ENST00000584223 273 ntBASIC17.73■□□□□ 0.43
DDR1Q08345 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.73■□□□□ 0.43
DDR1Q08345 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC17.73■□□□□ 0.43
DDR1Q08345 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 KRT8P43-201ENST00000406052 1458 ntBASIC17.73■□□□□ 0.43
DDR1Q08345 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
DDR1Q08345 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
DDR1Q08345 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.73■□□□□ 0.43
DDR1Q08345 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.73■□□□□ 0.43
DDR1Q08345 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
DDR1Q08345 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDR1Q08345 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.73■□□□□ 0.43
DDR1Q08345 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
DDR1Q08345 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC17.72■□□□□ 0.43
DDR1Q08345 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDR1Q08345 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDR1Q08345 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.72■□□□□ 0.43
DDR1Q08345 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
DDR1Q08345 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDR1Q08345 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.72■□□□□ 0.43
DDR1Q08345 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
DDR1Q08345 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDR1Q08345 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.72■□□□□ 0.43
DDR1Q08345 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDR1Q08345 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
DDR1Q08345 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.72■□□□□ 0.43
DDR1Q08345 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC17.72■□□□□ 0.43
DDR1Q08345 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
DDR1Q08345 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC17.72■□□□□ 0.43
DDR1Q08345 AC092896.1-201ENST00000465850 380 ntBASIC17.72■□□□□ 0.43
DDR1Q08345 AC092903.1-201ENST00000466506 262 ntBASIC17.72■□□□□ 0.43
DDR1Q08345 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC17.72■□□□□ 0.43
DDR1Q08345 AC100858.1-201ENST00000514059 1228 ntBASIC17.72■□□□□ 0.43
DDR1Q08345 HNRNPA1P5-201ENST00000558213 966 ntBASIC17.72■□□□□ 0.43
DDR1Q08345 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDR1Q08345 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC17.72■□□□□ 0.43
DDR1Q08345 AL136982.5-201ENST00000605222 294 ntBASIC17.72■□□□□ 0.43
DDR1Q08345 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDR1Q08345 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
DDR1Q08345 AC132872.4-202ENST00000622924 2756 ntBASIC17.72■□□□□ 0.43
DDR1Q08345 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
DDR1Q08345 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
DDR1Q08345 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDR1Q08345 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDR1Q08345 AC117503.4-201ENST00000623229 1418 ntBASIC17.72■□□□□ 0.43
DDR1Q08345 PKD1P1-201ENST00000458669 6805 ntBASIC17.72■□□□□ 0.43
DDR1Q08345 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.71■□□□□ 0.43
DDR1Q08345 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
DDR1Q08345 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms