Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
UBA52P62987 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
UBA52P62987 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
UBA52P62987 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.7□□□□□ -0.38
UBA52P62987 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 RPL5P21-201ENST00000404620 815 ntBASIC12.7□□□□□ -0.38
UBA52P62987 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.7□□□□□ -0.38
UBA52P62987 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.7□□□□□ -0.38
UBA52P62987 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.7□□□□□ -0.38
UBA52P62987 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.7□□□□□ -0.38
UBA52P62987 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 AL583810.1-201ENST00000553344 1045 ntBASIC12.7□□□□□ -0.38
UBA52P62987 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.7□□□□□ -0.38
UBA52P62987 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.7□□□□□ -0.38
UBA52P62987 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
UBA52P62987 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.7□□□□□ -0.38
UBA52P62987 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
UBA52P62987 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
UBA52P62987 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
UBA52P62987 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
UBA52P62987 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
UBA52P62987 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
UBA52P62987 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBA52P62987 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.7□□□□□ -0.38
UBA52P62987 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 AC093525.8-201ENST00000624099 1342 ntBASIC12.69□□□□□ -0.38
UBA52P62987 AC020658.7-201ENST00000624274 2442 ntBASIC12.69□□□□□ -0.38
UBA52P62987 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 AC114271.1-201ENST00000612689 2813 ntBASIC12.69□□□□□ -0.38
UBA52P62987 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
UBA52P62987 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 BRWD1P1-201ENST00000401091 371 ntBASIC12.69□□□□□ -0.38
UBA52P62987 AZGP1P1-201ENST00000411909 902 ntBASIC12.69□□□□□ -0.38
UBA52P62987 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.69□□□□□ -0.38
UBA52P62987 RPL13P2-201ENST00000440687 659 ntBASIC12.69□□□□□ -0.38
UBA52P62987 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UBA52P62987 AL355994.2-201ENST00000447882 704 ntBASIC12.69□□□□□ -0.38
UBA52P62987 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.69□□□□□ -0.38
UBA52P62987 FAM86LP-201ENST00000478302 853 ntBASIC12.69□□□□□ -0.38
UBA52P62987 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.69□□□□□ -0.38
UBA52P62987 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 AC243562.2-201ENST00000561247 970 ntBASIC12.69□□□□□ -0.38
UBA52P62987 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms